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HG10006691 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006691
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscriptional corepressor LEUNIG_HOMOLOG
Genome locationChr07:21060548..21065107
RNA-Seq ExpressionHG10006691
SyntenyHG10006691
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006594 - LIS1 homology motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7151983.1 hypothetical protein RHSIM_Rhsim02G0132200 [Rhododendron simsii]1.3e-0730.94Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL
        E+ LD YIY+YL+K+ +   A +F  +    N     LA+I+EP G L  WW  FWD+Y SR      RP   + + V  TQ +      + T ++    
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL

Query:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK
        ++      ++ NF K+ G++++ F   + P+ H  PNL+
Subjt:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK

KAG5561690.1 hypothetical protein RHGRI_004667 [Rhododendron griersonianum]3.8e-0730.22Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL
        E+ LD YIY+YL+K+ +   A +F  +    N     LA+I+EP G L  WW  FWD+Y SR      RP   + + V  TQ +      + T ++    
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL

Query:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK
        ++      ++ NF K+ G++++ F   + P+ +  PNL+
Subjt:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK

KZM94614.1 hypothetical protein DCAR_017857 [Daucus carota subsp. sativus]6.3e-1033.88Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R
        E  LD YI++YL+K++Y  T+R+F+ E       T    +ID P G L  WW  FWD++++R+KL  P    +   QV   Q+   +      ES R  +
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R

Query:  LKKYLDDGRISKNFLKLLGEE
        + +YL  G+I +   +LLG++
Subjt:  LKKYLDDGRISKNFLKLLGEE

XP_017250164.1 PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Daucus carota subsp. sativus]6.3e-1033.88Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R
        E  LD YI++YL+K++Y  T+R+F+ E       T    +ID P G L  WW  FWD++++R+KL  P    +   QV   Q+   +      ES R  +
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R

Query:  LKKYLDDGRISKNFLKLLGEE
        + +YL  G+I +   +LLG++
Subjt:  LKKYLDDGRISKNFLKLLGEE

XP_017250165.1 PREDICTED: transcriptional corepressor LEUNIG-like isoform X2 [Daucus carota subsp. sativus]6.3e-1033.88Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R
        E  LD YI++YL+K++Y  T+R+F+ E       T    +ID P G L  WW  FWD++++R+KL  P    +   QV   Q+   +      ES R  +
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R

Query:  LKKYLDDGRISKNFLKLLGEE
        + +YL  G+I +   +LLG++
Subjt:  LKKYLDDGRISKNFLKLLGEE

TrEMBL top hitse value%identityAlignment
A0A164YJN2 Uncharacterized protein3.1e-1033.88Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R
        E  LD YI++YL+K++Y  T+R+F+ E       T    +ID P G L  WW  FWD++++R+KL  P    +   QV   Q+   +      ES R  +
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRR-R

Query:  LKKYLDDGRISKNFLKLLGEE
        + +YL  G+I +   +LLG++
Subjt:  LKKYLDDGRISKNFLKLLGEE

A0A2U1NBA3 Glucan synthase-like 81.7e-0543.75Show/hide
Query:  LDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQ
        LD YI +YL+KKK   +A++F+ E     +  L +  ID P G L  WW  FWDV++SRH+ +Q
Subjt:  LDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQ

A0A3S3Q9F8 Transcriptional corepressor LEUNIG_HOMOLOG-like protein isoform X11.2e-0636.9Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR--HKLNQPRPNYSQLNQVASTQ
        ++ LD YIY+YLLK+  +TTA+ F  E      D + LA ID P G L  WW  FWD++++R   K ++   +Y ++ Q+ + +
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR--HKLNQPRPNYSQLNQVASTQ

A0A4D6KZW3 U4/U6 small nuclear ribonucleoprotein PRP44.1e-0740.79Show/hide
Query:  RLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQV
        RLD YIY+YL K++ +TTARLFK E   +        +I+ P G L  WW  FWD+Y++R        +YS+  Q+
Subjt:  RLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQV

A0A6A4LCX4 Uncharacterized protein (Fragment)2.4e-0730.22Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL
        E+ LD YIY+YL+K+ +   A +F  +    N     LA+I+EP G L  WW  FWD+Y SR      RP   + + V  TQ +      + T ++    
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRL

Query:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK
        ++      ++ NF K+ G++++ F   + P+ +  PNL+
Subjt:  KKYLDDGRISKNFLKLLGEEDNPF---KTPLKHSTPNLK

SwissProt top hitse value%identityAlignment
O48847 Transcriptional corepressor LEUNIG_HOMOLOG2.0e-0640.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

Q9FUY2 Transcriptional corepressor LEUNIG6.4e-0535.48Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YI++YL+K+    TA+ F+ E   ++        ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

Arabidopsis top hitse value%identityAlignment
AT2G32700.1 LEUNIG_homolog1.4e-0740.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

AT2G32700.2 LEUNIG_homolog1.4e-0740.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

AT2G32700.3 LEUNIG_homolog1.4e-0740.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

AT2G32700.4 LEUNIG_homolog1.4e-0740.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR

AT2G32700.5 LEUNIG_homolog1.4e-0740.32Show/hide
Query:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR
        ++ LD YIY+YL+KKK + TA+ F     T  + +     ID P G L  WW  FWD++++R
Subjt:  EERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAGGTTGGATACTTACATATACGAATACCTTCTAAAAAAGAAGTATTATACAACTGCAAGATTATTTAAAGGCGAGAGGACTACTACGAATCGAGATACTCT
ACAACTCGCATTAATTGATGAGCCTAATGGTCATCTTGAGAGGTGGTGGTTTAATTTTTGGGACGTCTATTTATCAAGGCATAAGTTAAACCAACCACGACCTAATTATT
CTCAATTAAATCAGGTGGCTTCAACACAAGATTTGACTGCAAAGTTCCCCTCTGATGGTACAGAATCGATGAGAAGAAGGTTAAAGAAGTATCTTGATGATGGGCGTATC
TCGAAGAACTTCCTAAAACTACTGGGCGAGGAGGATAATCCATTCAAGACGCCATTAAAGCACTCAACTCCAAACTTAAAAGAATTTCAGAGCTCGAAAGTACCACTCAT
AATCATTGATGACAGCGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAGAAGCCCCATCCATGATAATGATAACCAAGACTCCCTTTATTTCAACCCAGAGGAACTCCTAA
AACTACTTGACGACGAACCATATGAAGAAGCGCTTAGACTATATAATTCAGAACGAGGGAAGCACCTGTTGGCAGCCACTGATGAAGAGCCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAGGTTGGATACTTACATATACGAATACCTTCTAAAAAAGAAGTATTATACAACTGCAAGATTATTTAAAGGCGAGAGGACTACTACGAATCGAGATACTCT
ACAACTCGCATTAATTGATGAGCCTAATGGTCATCTTGAGAGGTGGTGGTTTAATTTTTGGGACGTCTATTTATCAAGGCATAAGTTAAACCAACCACGACCTAATTATT
CTCAATTAAATCAGGTGGCTTCAACACAAGATTTGACTGCAAAGTTCCCCTCTGATGGTACAGAATCGATGAGAAGAAGGTTAAAGAAGTATCTTGATGATGGGCGTATC
TCGAAGAACTTCCTAAAACTACTGGGCGAGGAGGATAATCCATTCAAGACGCCATTAAAGCACTCAACTCCAAACTTAAAAGAATTTCAGAGCTCGAAAGTACCACTCAT
AATCATTGATGACAGCGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAGAAGCCCCATCCATGATAATGATAACCAAGACTCCCTTTATTTCAACCCAGAGGAACTCCTAA
AACTACTTGACGACGAACCATATGAAGAAGCGCTTAGACTATATAATTCAGAACGAGGGAAGCACCTGTTGGCAGCCACTGATGAAGAGCCCCATTAA
Protein sequenceShow/hide protein sequence
MEERLDTYIYEYLLKKKYYTTARLFKGERTTTNRDTLQLALIDEPNGHLERWWFNFWDVYLSRHKLNQPRPNYSQLNQVASTQDLTAKFPSDGTESMRRRLKKYLDDGRI
SKNFLKLLGEEDNPFKTPLKHSTPNLKEFQSSKVPLIIIDDSEEEEEEEEERRSPIHDNDNQDSLYFNPEELLKLLDDEPYEEALRLYNSERGKHLLAATDEEPH