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HG10006700 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006700
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationChr07:21180601..21184034
RNA-Seq ExpressionHG10006700
SyntenyHG10006700
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030420.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-3666.42Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY
        MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H NQ      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSY
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY

Query:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        KVD ER+ VVVTGDV  FEV+QC+SKV+SVEILE Q+
Subjt:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

XP_008458177.1 PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo]3.4e-4975.34Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI
        MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGFKD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK I
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI

Query:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        SKI+GV+S+KVDMERE VVVTGDVFPFEVM+CISKVKSVEILE QD
Subjt:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

XP_022946348.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]3.3e-3666.42Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY
        MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H NQ      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSY
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY

Query:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        KVD ER+ VVVTGDV  FEV+QC+SKV+SVEILE Q+
Subjt:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

XP_022999545.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]3.5e-3867.88Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY
        MGK V GIGKVFSCF+N+ ASSS  C E E  F+ KQPLM  Q  +S LL F D I+H NQ      NPKVV LRVSMHC+GCARRVEK+I KIEGVDS+
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY

Query:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        KVD ER+ VVVTGDV  FEV+QC+SKV+SVEILEHQ+
Subjt:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

XP_031736582.1 uncharacterized protein LOC116402031 [Cucumis sativus]1.4e-5077.62Show/hide
Query:  MGKLVMGIGKVFSCFINTT-ASSSC----LCLENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISK
        MGKLVM IGKVFSCFINTT +S+SC    L +E+ +NFDQKQPLM KQTTS+   LLGFKD I HQN+TL L  NPKVV +RVSMHC+GCARRVEKHISK
Subjt:  MGKLVMGIGKVFSCFINTT-ASSSC----LCLENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISK

Query:  IEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQ
        I+GV+S+KVDMERE VVVTGDVFPFEVMQCISKVKSVEILE Q
Subjt:  IEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQ

TrEMBL top hitse value%identityAlignment
A0A1S3C8H9 uncharacterized protein LOC1034976911.6e-4975.34Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI
        MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGFKD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK I
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI

Query:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        SKI+GV+S+KVDMERE VVVTGDVFPFEVM+CISKVKSVEILE QD
Subjt:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

A0A2N9H2C1 HMA domain-containing protein9.0e-3260Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLC---LENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGV
        MGKL    GKV  CF  ++ SSSC C   LE  D F+ K PL+A  +  SQLL  KD +A  NQTLA  L PK+V LRVSMHC+GCAR+VEKHISK+EGV
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLC---LENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGV

Query:  DSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEI
         SYKVD+E +MVVVTGD+ PFEV++ +SKVK+ E+
Subjt:  DSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEI

A0A5A7V1Y2 Copper-binding family protein1.6e-4975.34Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI
        MGKLV+ IGKVFSCFINTT SSS  C      +E+ +NFDQKQPLMAKQTTS+   LLGFKD I HQN+TL  L  NPKVV +RVSMHC+GCARRVEK I
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLC------LENEDNFDQKQPLMAKQTTSS--QLLGFKDAIAHQNQTL-ALHLNPKVVALRVSMHCSGCARRVEKHI

Query:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        SKI+GV+S+KVDMERE VVVTGDVFPFEVM+CISKVKSVEILE QD
Subjt:  SKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

A0A6J1G3J1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X11.6e-3666.42Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY
        MGK V GIGKVFSCF+N+ ASSS  C + E  F+ KQPLM  Q  +S LL   D I+H NQ      NPKVV LRVSMHC+GCARRVEK+I KIEGVDSY
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY

Query:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        KVD ER+ VVVTGDV  FEV+QC+SKV+SVEILE Q+
Subjt:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

A0A6J1KFP0 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X11.7e-3867.88Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY
        MGK V GIGKVFSCF+N+ ASSS  C E E  F+ KQPLM  Q  +S LL F D I+H NQ      NPKVV LRVSMHC+GCARRVEK+I KIEGVDS+
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSY

Query:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD
        KVD ER+ VVVTGDV  FEV+QC+SKV+SVEILEHQ+
Subjt:  KVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHQD

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 459.6e-0739.13Show/hide
Query:  HQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISK
        H N  L + L+  +V L V M C GC ++V + ISK++GVD+ ++D++R+ V VTG V   EV++ + +
Subjt:  HQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISK

Q0WV37 Heavy metal-associated isoprenylated plant protein 341.3e-0645.9Show/hide
Query:  LRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKV-KSVEIL
        L+V++HC GC  +V+K + KIEGV S K D+E+  V VTG++ P  +++ +SK  K  EIL
Subjt:  LRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKV-KSVEIL

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 21.7e-1134.83Show/hide
Query:  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +T  ++    +D    + +T     + +VV L+VS+HC GC  +V KH+++++GV S+ +D   + V VTGD+ P E++  ISKVK+ +
Subjt:  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 19.0e-1354.84Show/hide
Query:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 31.7e-1150Show/hide
Query:  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +VV LRVS+  HC GC  +V+KH+SK++GV S+ +D   + V VTGD+ P EV+ C+SKVK+ +
Subjt:  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

Arabidopsis top hitse value%identityAlignment
AT2G37390.1 Chloroplast-targeted copper chaperone protein1.2e-1234.83Show/hide
Query:  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +T  ++    +D    + +T     + +VV L+VS+HC GC  +V KH+++++GV S+ +D   + V VTGD+ P E++  ISKVK+ +
Subjt:  QTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

AT3G24450.1 Heavy metal transport/detoxification superfamily protein8.6e-2745.99Show/hide
Query:  MGKLVMGIGKVFSCFINTTASSSCLCLE---NEDNFDQKQPLMAKQT-TSSQLLGFKDAI-AHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIE
        MGKL   IG+V+ C    T   SC CL    +E+   +K+PL+   T  S +++  KD + A   QTLA HL PK+V L+VSMHC GCA++VEKHISK++
Subjt:  MGKLVMGIGKVFSCFINTTASSSCLCLE---NEDNFDQKQPLMAKQT-TSSQLLGFKDAI-AHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIE

Query:  GVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEI
        GV  YKV++E + VVV G++ P +V++ I KVK+ ++
Subjt:  GVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVEI

AT3G53530.1 Chloroplast-targeted copper chaperone protein1.2e-1250Show/hide
Query:  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +VV LRVS+  HC GC  +V+KH+SK++GV S+ +D   + V VTGD+ P EV+ C+SKVK+ +
Subjt:  KVVALRVSM--HCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

AT5G02600.1 Heavy metal transport/detoxification superfamily protein6.4e-1454.84Show/hide
Query:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE

AT5G02600.2 Heavy metal transport/detoxification superfamily protein6.4e-1454.84Show/hide
Query:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE
        +VV LRVS+HC GCA +V+KH+SK++GV SY +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  KVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVVVTGDVFPFEVMQCISKVKSVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACA
GCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGC
TGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTT
GTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAACTGGTGATGGGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGCTTCCAGTTCGTGCTTGTGCTTGGAAAATGAAGACAACTTCGATCAGAAACA
GCCATTAATGGCTAAACAAACAACATCGTCTCAGCTTCTCGGATTCAAGGATGCGATTGCTCATCAAAACCAAACCCTTGCTCTTCATTTGAACCCCAAGGTGGTGGCGC
TGAGGGTGTCAATGCATTGCAGTGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGAAGGTGTGGATTCATACAAGGTAGATATGGAAAGGGAGATGGTGGTT
GTTACTGGAGATGTTTTTCCTTTTGAAGTTATGCAATGCATTTCTAAAGTGAAAAGTGTAGAGATTCTGGAACATCAAGACTAA
Protein sequenceShow/hide protein sequence
MGKLVMGIGKVFSCFINTTASSSCLCLENEDNFDQKQPLMAKQTTSSQLLGFKDAIAHQNQTLALHLNPKVVALRVSMHCSGCARRVEKHISKIEGVDSYKVDMEREMVV
VTGDVFPFEVMQCISKVKSVEILEHQD