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HG10006714 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006714
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:21311966..21312328
RNA-Seq ExpressionHG10006714
SyntenyHG10006714
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040106.1 hypothetical protein E6C27_scaffold366G00810 [Cucumis melo var. makuwa]6.9e-0636.17Show/hide
Query:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK
        +G   R+ +W P     LKLNV   CHL +   G+G+VI+ND+  LV   +L ++G +  E G    LL   + +      N ++ MDVE VVK
Subjt:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK

KAE8649322.1 hypothetical protein Csa_015048 [Cucumis sativus]5.8e-0539.24Show/hide
Query:  GVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDC
        G+ + I RW PP    LKLNVD    L    +G+G +I+N RG  VA +A  ++G   AE G+   LL   Q V    C
Subjt:  GVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDC

TYK21731.1 hypothetical protein E5676_scaffold859G001030 [Cucumis melo var. makuwa]1.8e-0635Show/hide
Query:  GSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK
        G++   +G   R+ +W P     LKLNV   CHL +   G+G+VI+ND+  LV   +L ++G +  E G    LL   + +      N ++ MDVE VVK
Subjt:  GSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK

XP_017256601.1 PREDICTED: uncharacterized protein LOC108226171 [Daucus carota subsp. sativus]1.5e-0529.03Show/hide
Query:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVV
        +GVH+   +W PP  GW+K+N+D  C   +  +G+G V++N+RG  +  +  +  G   A   +   L  A   VK    +  + E D + +V
Subjt:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVV

XP_031120971.1 uncharacterized protein LOC116024211 [Ipomoea triloba]7.6e-0531.07Show/hide
Query:  WKDPIGSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDV
        WK     + + S    R  RW PP++G LKLN+D    + N+ +GMG VI++ +G  VA +A    G+   +  +   +  A   +K  D  +V +E D 
Subjt:  WKDPIGSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDV

Query:  ETV
        + V
Subjt:  ETV

TrEMBL top hitse value%identityAlignment
A0A5A7TDE1 Uncharacterized protein3.3e-0636.17Show/hide
Query:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK
        +G   R+ +W P     LKLNV   CHL +   G+G+VI+ND+  LV   +L ++G +  E G    LL   + +      N ++ MDVE VVK
Subjt:  SGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK

A0A5D3DDI5 Uncharacterized protein8.8e-0735Show/hide
Query:  GSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK
        G++   +G   R+ +W P     LKLNV   CHL +   G+G+VI+ND+  LV   +L ++G +  E G    LL   + +      N ++ MDVE VVK
Subjt:  GSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTGGAGTGTGGAAAGATCCGATTGGTAGTCGTACAATTGTGTCGGGAGTTCACATAAGGATTGTAAGATGGATCCCGCCGGCGAGAGGATGGTTGAAGCTTAA
TGTTGACACGCCTTGTCACTTAAAAAACGCATCTCTTGGTATGGGCGTCGTTATTAAAAATGATAGAGGTGTGTTGGTAGCGACCCAAGCGTTGGTCCGCCTAGGGTATA
TGATGGCTGAAGCAGGGAAGTATTGGCAGTTGTTGACGGCGTCGCAAATGGTCAAGGCGCGCGACTGTGAAAATGTGCTGGTGGAGATGGATGTCGAAACTGTTGTGAAG
AAGCTAATTGTCTTTTGCCTTATCTATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGTGGAGTGTGGAAAGATCCGATTGGTAGTCGTACAATTGTGTCGGGAGTTCACATAAGGATTGTAAGATGGATCCCGCCGGCGAGAGGATGGTTGAAGCTTAA
TGTTGACACGCCTTGTCACTTAAAAAACGCATCTCTTGGTATGGGCGTCGTTATTAAAAATGATAGAGGTGTGTTGGTAGCGACCCAAGCGTTGGTCCGCCTAGGGTATA
TGATGGCTGAAGCAGGGAAGTATTGGCAGTTGTTGACGGCGTCGCAAATGGTCAAGGCGCGCGACTGTGAAAATGTGCTGGTGGAGATGGATGTCGAAACTGTTGTGAAG
AAGCTAATTGTCTTTTGCCTTATCTATATTTGA
Protein sequenceShow/hide protein sequence
MMGGVWKDPIGSRTIVSGVHIRIVRWIPPARGWLKLNVDTPCHLKNASLGMGVVIKNDRGVLVATQALVRLGYMMAEAGKYWQLLTASQMVKARDCENVLVEMDVETVVK
KLIVFCLIYI