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HG10006717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006717
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:21351428..21352153
RNA-Seq ExpressionHG10006717
SyntenyHG10006717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RHN52917.1 hypothetical protein MtrunA17_Chr6g0485771 [Medicago truncatula]4.1e-0552.98Show/hide
Query:  PVEILDEEEDDDGVEGGGGLL-DGVD-------GVREVGGGGLRPV-GGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAG----
        PV+ILDE    DG EGGGG+L DG D       GVRE G G + P  GG    V  G GGE EG+DGGG +   +G    GV  GV+GGG+DGV G    
Subjt:  PVEILDEEEDDDGVEGGGGLL-DGVD-------GVREVGGGGLRPV-GGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAG----

Query:  GAEGGGGDGVVVGGGE-VDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAG
        G +GGG +GV  GG E V GGG  GV GG A+GV GGG V L AGG+ GAG
Subjt:  GAEGGGGDGVVVGGGE-VDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAG

TrEMBL top hitse value%identityAlignment
A0A396HPX3 Uncharacterized protein2.0e-0552.98Show/hide
Query:  PVEILDEEEDDDGVEGGGGLL-DGVD-------GVREVGGGGLRPV-GGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAG----
        PV+ILDE    DG EGGGG+L DG D       GVRE G G + P  GG    V  G GGE EG+DGGG +   +G    GV  GV+GGG+DGV G    
Subjt:  PVEILDEEEDDDGVEGGGGLL-DGVD-------GVREVGGGGLRPV-GGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAG----

Query:  GAEGGGGDGVVVGGGE-VDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAG
        G +GGG +GV  GG E V GGG  GV GG A+GV GGG V L AGG+ GAG
Subjt:  GAEGGGGDGVVVGGGE-VDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAG

A0A419PEF2 Uncharacterized protein8.3e-0452.03Show/hide
Query:  GPGGGPVEILDEEEDDDGVEGGGGLLDGVDGVREVGGGGLRPVGGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAGG----AEG
        G GGG     D+++DDDG  GGGG   G  GV   GGGG   VGG GG V  GGG    G+ GGG    G G   GG G G  GGG  GV GG      G
Subjt:  GPGGGPVEILDEEEDDDGVEGGGGLLDGVDGVREVGGGGLRPVGGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAGG----AEG

Query:  GGGDGVVVGGGEVDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAGVG
        GGG GV VGG    GGG VGV GG   GVGGGG  V V GG  G GVG
Subjt:  GGGDGVVVGGGEVDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAGVG

A0A803P040 Uncharacterized protein7.5e-0551.85Show/hide
Query:  GPVEILDEEEDDDGVEGGGGL---LDGVDG--VREVGGGGLRPVGGAGGLVE--DGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAGGAEG-
        G +E    EED   ++GGGGL   L+GV+G  VR+ GGG +  V G  G+V+  DGGGGE +   GG V  GGEG  V G G    G G  GVA G  G 
Subjt:  GPVEILDEEEDDDGVEGGGGL---LDGVDG--VREVGGGGLRPVGGAGGLVE--DGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGSDGVAGGAEG-

Query:  --GGGDGVVVGGGEVDGGGCVGVD---GGAALGVGGGGDVVLVAGGDVGAG--VGVDIGMEK
          GGGD V  GG  V GGG  GVD   GG ALGV GGG+V LVAGG+ GAG   GVDIG+ K
Subjt:  --GGGDGVVVGGGEVDGGGCVGVD---GGAALGVGGGGDVVLVAGGDVGAG--VGVDIGMEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATAAACCCTAGAAAGTTTGAGTACTCTGAAATTGTCAAGTTTCCGGCGATCATTTTACCTTTAGGGCCAGGCGGAGGTCCAGTTGAAATATTAGACGAGGAGGA
GGACGATGACGGCGTTGAGGGAGGTGGAGGACTTCTTGACGGAGTGGACGGCGTACGAGAAGTTGGAGGCGGCGGACTACGTCCAGTTGGAGGAGCCGGAGGGCTAGTAG
AAGACGGAGGAGGTGGAGAACTCGAAGGCCTGGATGGCGGAGGAGTGGAAGCCGGCGGTGAGGGAGATGCAGTGGGCGGGGTGGGCTGGGGAGTAGACGGTGGAGGCAGT
GACGGGGTGGCCGGAGGTGCGGAAGGCGGAGGCGGCGACGGAGTGGTTGTTGGTGGTGGTGAAGTAGACGGTGGCGGTTGTGTTGGAGTCGATGGTGGGGCAGCACTAGG
GGTTGGTGGCGGCGGAGACGTCGTATTGGTCGCCGGCGGAGACGTCGGCGCCGGAGTAGGGGTTGACATTGGAATGGAAAAAATCAGTAATCAAAATATCCGAAATCAAA
AACTCATACAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATAAACCCTAGAAAGTTTGAGTACTCTGAAATTGTCAAGTTTCCGGCGATCATTTTACCTTTAGGGCCAGGCGGAGGTCCAGTTGAAATATTAGACGAGGAGGA
GGACGATGACGGCGTTGAGGGAGGTGGAGGACTTCTTGACGGAGTGGACGGCGTACGAGAAGTTGGAGGCGGCGGACTACGTCCAGTTGGAGGAGCCGGAGGGCTAGTAG
AAGACGGAGGAGGTGGAGAACTCGAAGGCCTGGATGGCGGAGGAGTGGAAGCCGGCGGTGAGGGAGATGCAGTGGGCGGGGTGGGCTGGGGAGTAGACGGTGGAGGCAGT
GACGGGGTGGCCGGAGGTGCGGAAGGCGGAGGCGGCGACGGAGTGGTTGTTGGTGGTGGTGAAGTAGACGGTGGCGGTTGTGTTGGAGTCGATGGTGGGGCAGCACTAGG
GGTTGGTGGCGGCGGAGACGTCGTATTGGTCGCCGGCGGAGACGTCGGCGCCGGAGTAGGGGTTGACATTGGAATGGAAAAAATCAGTAATCAAAATATCCGAAATCAAA
AACTCATACAATTATAA
Protein sequenceShow/hide protein sequence
MSINPRKFEYSEIVKFPAIILPLGPGGGPVEILDEEEDDDGVEGGGGLLDGVDGVREVGGGGLRPVGGAGGLVEDGGGGELEGLDGGGVEAGGEGDAVGGVGWGVDGGGS
DGVAGGAEGGGGDGVVVGGGEVDGGGCVGVDGGAALGVGGGGDVVLVAGGDVGAGVGVDIGMEKISNQNIRNQKLIQL