; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006821 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006821
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein trichome birefringence-like 16 isoform X1
Genome locationChr07:22271494..22273134
RNA-Seq ExpressionHG10006821
SyntenyHG10006821
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0010411 - xyloglucan metabolic process (biological process)
GO:0045492 - xylan biosynthetic process (biological process)
GO:1990937 - xylan acetylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016407 - acetyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10817.1 protein trichome birefringence-like 14 isoform X2 [Cucumis melo var. makuwa]4.1e-8277.17Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQ
        + PI+YN+STID+KLK+NQ
Subjt:  MLPIIYNVSTIDDKLKRNQ

XP_004141075.1 protein trichome birefringence-like 14 isoform X1 [Cucumis sativus]3.3e-8778.83Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV
        MKKGFYGLRGKELSL+TIALMC VIIMLTWEKTPLLNT PPPQTRLQLS DRGRLVSISP  QQ HT EYVP+FEDKN V+NQEARR  SHSYSNEEDTV
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV

Query:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADSM
        SSQNKGN IGSRE THKQIVELRNDGNSGSPKEII DETIHNQIVV+GK APIKKE LKPKP+++DEKI++ VEENYS QAEQ            S DS+
Subjt:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADSM

Query:  LPIIYNVSTIDDKLKRNQGAEY
        LPI+YN+STID+KLK+NQ   Y
Subjt:  LPIIYNVSTIDDKLKRNQGAEY

XP_008459933.1 PREDICTED: protein trichome birefringence-like 14 isoform X1 [Cucumis melo]2.2e-8376.23Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQGAEY
        + PI+YN+STID+KLK+NQ  +Y
Subjt:  MLPIIYNVSTIDDKLKRNQGAEY

XP_008459948.1 PREDICTED: protein trichome birefringence-like 14 isoform X2 [Cucumis melo]6.4e-8377.27Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQG
        + PI+YN+STID+KLK+NQG
Subjt:  MLPIIYNVSTIDDKLKRNQG

XP_038890327.1 protein trichome birefringence-like 14 isoform X1 [Benincasa hispida]3.6e-9487.62Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGE+VPVFED+NIVNNQEAR  FSH YSNEEDTV
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV

Query:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVSTIDD
        SSQNKGNP+GSRE THKQIVELRNDGNSGSP EII DETIHNQIVVEGKKAPIK+E  KPKPEKVD KIKQVVEENYS QAEQ+ DS+   IYN STIDD
Subjt:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVSTIDD

Query:  KLKRNQGAEY
        KLKR Q   Y
Subjt:  KLKRNQGAEY

TrEMBL top hitse value%identityAlignment
A0A0A0LHP3 PMR5N domain-containing protein1.6e-8778.83Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV
        MKKGFYGLRGKELSL+TIALMC VIIMLTWEKTPLLNT PPPQTRLQLS DRGRLVSISP  QQ HT EYVP+FEDKN V+NQEARR  SHSYSNEEDTV
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTV

Query:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADSM
        SSQNKGN IGSRE THKQIVELRNDGNSGSPKEII DETIHNQIVV+GK APIKKE LKPKP+++DEKI++ VEENYS QAEQ            S DS+
Subjt:  SSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADSM

Query:  LPIIYNVSTIDDKLKRNQGAEY
        LPI+YN+STID+KLK+NQ   Y
Subjt:  LPIIYNVSTIDDKLKRNQGAEY

A0A1S3CBG6 protein trichome birefringence-like 14 isoform X23.1e-8377.27Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQG
        + PI+YN+STID+KLK+NQG
Subjt:  MLPIIYNVSTIDDKLKRNQG

A0A1S3CBT7 protein trichome birefringence-like 14 isoform X11.1e-8376.23Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQGAEY
        + PI+YN+STID+KLK+NQ  +Y
Subjt:  MLPIIYNVSTIDDKLKRNQGAEY

A0A5D3CFP8 Protein trichome birefringence-like 14 isoform X22.0e-8277.17Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT
        MKKGFYGLRGKELSL+TIALMCMVIIMLTWEKTPLLNT PPPQTRLQ+S DRGRLVSISP  QQGHT EYVP+FEDKN V+NQ EARR FSHSYSNEED+
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQ-EARRSFSHSYSNEEDT

Query:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS
        VSSQ+KGN IGS EATHK +VELRNDGNSGSPKEII DETIHNQIVV+GK+APIKKE LKPK +++D K +Q VEENYS QAEQ            S DS
Subjt:  VSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQ------------SADS

Query:  MLPIIYNVSTIDDKLKRNQ
        + PI+YN+STID+KLK+NQ
Subjt:  MLPIIYNVSTIDDKLKRNQ

A0A6J1DK84 protein trichome birefringence-like 16 isoform X11.3e-7373.71Show/hide
Query:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPD--RGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEED
        MKK FYGLRGKELSL+TIALMCMVIIMLTWEKTPLL+TFPPPQTRLQ S D   G LVS S LEQQGH  EY+P FEDKN VNNQE  R+FSHSYSN+ED
Subjt:  MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPD--RGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEED

Query:  TVSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVV-EGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVST
        T S QNK   +GSR ATHKQIVELR DG+SGSPKE+I DETI NQIVV EG +A  KKE  KPK  +VDEKIKQVVEENYS Q +QS DS+LPI YNVS 
Subjt:  TVSSQNKGNPIGSREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVV-EGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVST

Query:  IDDKLKRNQGAEY
        +D+KL+R+Q   Y
Subjt:  IDDKLKRNQGAEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGGTTTTTATGGACTGAGGGGTAAAGAGTTATCTCTTATAACCATTGCCTTGATGTGCATGGTTATTATTATGTTGACATGGGAGAAAACTCCGCTTCTTAA
TACCTTTCCTCCACCTCAGACTCGGTTGCAGCTGTCTCCAGACCGAGGTAGACTGGTTAGTATCTCTCCTTTGGAGCAACAAGGACATACTGGGGAATATGTTCCTGTTT
TTGAAGATAAAAACATTGTAAATAATCAAGAAGCTCGTAGGTCGTTTTCTCATAGTTATTCAAATGAAGAGGACACAGTATCTTCTCAGAATAAAGGAAACCCTATAGGT
TCCAGAGAAGCTACACACAAACAGATAGTGGAACTAAGAAATGATGGGAACTCAGGAAGTCCAAAAGAAATTATTGTAGATGAAACAATACATAACCAAATTGTGGTAGA
AGGTAAAAAGGCTCCTATAAAGAAAGAGGATTTAAAACCAAAACCAGAAAAAGTTGATGAAAAGATAAAGCAGGTAGTAGAAGAAAATTATTCAATACAAGCAGAACAGA
GTGCTGATTCAATGTTGCCGATTATCTACAACGTCAGCACGATAGATGATAAATTGAAAAGGAATCAAGGTGCGGAATATATTTCCTCTTTACTATTTGCCACTGCAAAT
TCTACTATGTTTCTTATATCCACATGGACACTTGGATCTGGAGAATTAGCACAGACCACGTTGAGTGTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGGTTTTTATGGACTGAGGGGTAAAGAGTTATCTCTTATAACCATTGCCTTGATGTGCATGGTTATTATTATGTTGACATGGGAGAAAACTCCGCTTCTTAA
TACCTTTCCTCCACCTCAGACTCGGTTGCAGCTGTCTCCAGACCGAGGTAGACTGGTTAGTATCTCTCCTTTGGAGCAACAAGGACATACTGGGGAATATGTTCCTGTTT
TTGAAGATAAAAACATTGTAAATAATCAAGAAGCTCGTAGGTCGTTTTCTCATAGTTATTCAAATGAAGAGGACACAGTATCTTCTCAGAATAAAGGAAACCCTATAGGT
TCCAGAGAAGCTACACACAAACAGATAGTGGAACTAAGAAATGATGGGAACTCAGGAAGTCCAAAAGAAATTATTGTAGATGAAACAATACATAACCAAATTGTGGTAGA
AGGTAAAAAGGCTCCTATAAAGAAAGAGGATTTAAAACCAAAACCAGAAAAAGTTGATGAAAAGATAAAGCAGGTAGTAGAAGAAAATTATTCAATACAAGCAGAACAGA
GTGCTGATTCAATGTTGCCGATTATCTACAACGTCAGCACGATAGATGATAAATTGAAAAGGAATCAAGGTGCGGAATATATTTCCTCTTTACTATTTGCCACTGCAAAT
TCTACTATGTTTCTTATATCCACATGGACACTTGGATCTGGAGAATTAGCACAGACCACGTTGAGTGTCATGTGA
Protein sequenceShow/hide protein sequence
MKKGFYGLRGKELSLITIALMCMVIIMLTWEKTPLLNTFPPPQTRLQLSPDRGRLVSISPLEQQGHTGEYVPVFEDKNIVNNQEARRSFSHSYSNEEDTVSSQNKGNPIG
SREATHKQIVELRNDGNSGSPKEIIVDETIHNQIVVEGKKAPIKKEDLKPKPEKVDEKIKQVVEENYSIQAEQSADSMLPIIYNVSTIDDKLKRNQGAEYISSLLFATAN
STMFLISTWTLGSGELAQTTLSVM