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HG10006837 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006837
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSEC12-like protein 2
Genome locationChr07:22428576..22429097
RNA-Seq ExpressionHG10006837
SyntenyHG10006837
Gene Ontology termsGO:0006817 - phosphate ion transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0016036 - cellular response to phosphate starvation (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601644.1 SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.2e-3985.29Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        ME PEP NSRKYG+PFYAAAWVPS SLKS+ E PESE  RDQSGD D+ ADD K+LPSHP TAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

XP_022957331.1 SEC12-like protein 2 [Cucurbita moschata]2.9e-3782.35Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        ME PE  NSRKYG+PFYAAAWVPS SLKS+ E PESE  RDQSGD D+SA+D ++LPSHP TAV+YYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

XP_022998007.1 SEC12-like protein 2 [Cucurbita maxima]3.7e-3783.65Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
        ME PEP NSRKYG+PFYAAAWVPS SLKS+ E  ESE  RDQS  GD D+SADD K+LPSHP TAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS

Query:  DQPV
        DQPV
Subjt:  DQPV

XP_023547354.1 SEC12-like protein 2 [Cucurbita pepo subsp. pepo]9.8e-3883.65Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
        ME PEP NSRKYG+PFYAAAWVPS SLKS+ E PESE  RDQS  GD D+SADD K+ PSHP TAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS

Query:  DQPV
        DQPV
Subjt:  DQPV

XP_038892140.1 SEC12-like protein 2 [Benincasa hispida]3.5e-4389.22Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        ME P+P NSRKYGIPFYA AW+PSTSLKSQ EPPESENH DQS D+DISADDNKSLPSHPATA NYYVAA GGGGEGRSGISNALILAHFDFESRSLSDQ
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

TrEMBL top hitse value%identityAlignment
A0A1S3C056 SEC12-like protein 25.4e-3477.45Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        METPEP NSRKYG+PFYAAAW PSTSLKS+ +P +SE+   QS D+DISA DNKS+PSH A   +YYVAAAGGGGEGRSGISNALILAHFDF+SRSLSD 
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

A0A5A7VE72 SEC12-like protein 25.4e-3477.45Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        METPEP NSRKYG+PFYAAAW PSTSLKS+ +P +SE+   QS D+DISA DNKS+PSH A   +YYVAAAGGGGEGRSGISNALILAHFDF+SRSLSD 
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

A0A6J1DBY0 SEC12-like protein 27.1e-3476.24Show/hide
Query:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQP
        +TP+P NSRKYG+PFYAAAW+P TS+KS+DEPP SEN  +QSG      DD+KSLP    TAV+YYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQP
Subjt:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQP

Query:  V
        V
Subjt:  V

A0A6J1GYX6 SEC12-like protein 21.4e-3782.35Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
        ME PE  NSRKYG+PFYAAAWVPS SLKS+ E PESE  RDQSGD D+SA+D ++LPSHP TAV+YYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQ

Query:  PV
        PV
Subjt:  PV

A0A6J1K6N4 SEC12-like protein 21.8e-3783.65Show/hide
Query:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
        ME PEP NSRKYG+PFYAAAWVPS SLKS+ E  ESE  RDQS  GD D+SADD K+LPSHP TAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS
Subjt:  METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQS--GDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLS

Query:  DQPV
        DQPV
Subjt:  DQPV

SwissProt top hitse value%identityAlignment
Q39221 SEC12-like protein 23.7e-1136.11Show/hide
Query:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQ--DEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSD
        ET +P N + YG+P YAA W+P   ++S+   +P +SE+  + S  S  S                  +  +GGGGEGRSGISN +++   D  + SLS+
Subjt:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQ--DEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSD

Query:  QPVNSLSV
        QP+  L V
Subjt:  QPVNSLSV

Arabidopsis top hitse value%identityAlignment
AT2G01470.1 SEC12P-like 2 protein2.6e-1236.11Show/hide
Query:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQ--DEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSD
        ET +P N + YG+P YAA W+P   ++S+   +P +SE+  + S  S  S                  +  +GGGGEGRSGISN +++   D  + SLS+
Subjt:  ETPEPYNSRKYGIPFYAAAWVPSTSLKSQ--DEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSD

Query:  QPVNSLSV
        QP+  L V
Subjt:  QPVNSLSV

AT5G50550.1 Transducin/WD40 repeat-like superfamily protein7.8e-0936.08Show/hide
Query:  PYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQPV
        P N + YG+P YA  W+        +E   S+  +DQ  D     DD  S  S        Y+  +GGGGEGRSGI N +++   D  + SLS+QP+
Subjt:  PYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQPV

AT5G50650.1 Transducin/WD40 repeat-like superfamily protein7.8e-0936.08Show/hide
Query:  PYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQPV
        P N + YG+P YA  W+        +E   S+  +DQ  D     DD  S  S        Y+  +GGGGEGRSGI N +++   D  + SLS+QP+
Subjt:  PYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCCCGAACCTTACAATTCCCGCAAGTATGGCATCCCTTTCTATGCAGCCGCTTGGGTGCCTTCCACTTCTCTCAAATCCCAGGACGAACCTCCAGAATCTGA
AAATCATCGAGATCAATCCGGTGATTCTGACATTTCCGCCGACGACAACAAATCACTTCCATCTCACCCCGCCACCGCTGTTAATTACTACGTAGCCGCCGCTGGAGGTG
GTGGAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTCGCTCATTTCGATTTTGAATCCCGCTCGCTCTCTGATCAGCCTGTAAACTCTCTCTCTGTTCCTTGGTGG
TTATTTCTCGTGTTTGAGTTTTTCTTTTCCGGTAAATGCTTGGTGTTGTTTGTCATTTCGTCTATGTTATTGAGTGAAGCAGAAATGGAGAGGGGTTATGAATTGTTTTC
GATTGTTGATTCTCTTGCTGATTCTGTGCTATATGCTACTATCTTTAAATTTATTATCCCGTTTGATATGTTTTTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCCCGAACCTTACAATTCCCGCAAGTATGGCATCCCTTTCTATGCAGCCGCTTGGGTGCCTTCCACTTCTCTCAAATCCCAGGACGAACCTCCAGAATCTGA
AAATCATCGAGATCAATCCGGTGATTCTGACATTTCCGCCGACGACAACAAATCACTTCCATCTCACCCCGCCACCGCTGTTAATTACTACGTAGCCGCCGCTGGAGGTG
GTGGAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTCGCTCATTTCGATTTTGAATCCCGCTCGCTCTCTGATCAGCCTGTAAACTCTCTCTCTGTTCCTTGGTGG
TTATTTCTCGTGTTTGAGTTTTTCTTTTCCGGTAAATGCTTGGTGTTGTTTGTCATTTCGTCTATGTTATTGAGTGAAGCAGAAATGGAGAGGGGTTATGAATTGTTTTC
GATTGTTGATTCTCTTGCTGATTCTGTGCTATATGCTACTATCTTTAAATTTATTATCCCGTTTGATATGTTTTTTTGGTGA
Protein sequenceShow/hide protein sequence
METPEPYNSRKYGIPFYAAAWVPSTSLKSQDEPPESENHRDQSGDSDISADDNKSLPSHPATAVNYYVAAAGGGGEGRSGISNALILAHFDFESRSLSDQPVNSLSVPWW
LFLVFEFFFSGKCLVLFVISSMLLSEAEMERGYELFSIVDSLADSVLYATIFKFIIPFDMFFW