CuGenDBv2

Gene ID	HG10006857
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	B-like cyclin
Genome location	Chr07:22640317..22641244
RNA-Seq Expression	HG10006857
Synteny	HG10006857
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0051301 - cell division (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039361 - Cyclin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022957558.1 cyclin-J18 isoform X1 [Cucurbita moschata]

9.7e-55

79.19

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        CMDVMDLLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

XP_022957561.1 cyclin-J18 isoform X2 [Cucurbita moschata]

1.0e-56

82.52

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMD
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD

Query:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        LLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

XP_023525666.1 cyclin-J18 isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-56

82.52

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMD
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD

Query:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        LLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

XP_023525674.1 cyclin-J18 isoform X3 [Cucurbita pepo subsp. pepo]

9.7e-55

79.19

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        CMDVMDLLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

XP_038893289.1 cyclin-J18 isoform X3 [Benincasa hispida]

2.5e-55

79.33

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  +++ I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITFIFLEELLIQ KKVAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWG
        CMDVMDLLYEKEETSVFYSSP SLAAAILVASYLITVPVQEWEFPV+PWG
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SSH3 B-like cyclin

3.0e-54

77.4

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD
        LL P++      F+  S + I  + HTS PLSIKLLK+FGD MIKEQHFMTRD LDA+L FEIGTANITFIFLEELL  FK+VAKVGELVNWEACMDVMD
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD

Query:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKL
        LLYE+EETSVFY SPCSLAAAILVASYLITVPVQEWEFP+VPW  L
Subjt:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKL

A0A6J1DTP7 B-like cyclin

6.8e-54

76.82

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  S + I  + H+S PLSIKLLKSFGDKMIKEQHFMTRD LDA      VL FEIGTA+ITFI+LEELLIQFKKVAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGK
        CMDVMDLLYEKEETSVFYSSPCSLAA+ILVASYLITVPVQEWEFP++PW K
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGK

A0A6J1GZG4 B-like cyclin

4.7e-55

79.19

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        CMDVMDLLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

A0A6J1GZK0 B-like cyclin

5.0e-57

82.52

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMD
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMD

Query:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        LLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  LLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

A0A6J1H0W7 B-like cyclin

4.7e-55

79.19

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL P++      F+  S + I  + HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        CMDVMDLLYEKEETSV YSSPCSLAAAILVASYLITVPVQEWEFPV+PW
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

SwissProt top hits

e value

%identity

Alignment

Q0DTM7 Cyclin-J18-like

8.3e-33

44.3

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL PL       F+    + I  + H  +PLS+K LK+ GD++I +QHF  RD  +A      V+++ IG+ NI F +LEELL+QF++++K+G+L+N + 
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW
        CM+++D+LYE E++S  ++SPC LAA+ LV +Y I+VP Q WEFP++PW
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPW

Q9C5X2 Cyclin-J18

5.4e-40

59.35

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Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL PL+      F   S I I  + H +R LS+  LKSFGDK+I EQ FM RD LDA      VLKFEIGT NI +  LE+LLIQFK+VAKVGE +N+EA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKLHYN
        CMD+MDLLYEKE+TS+ Y S  SLAA+ILV+SY+ITVP Q++EFP++PW K+  N
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKLHYN

Arabidopsis top hits

e value

%identity

Alignment

AT2G01905.1 cyclin J18

3.8e-41

59.35

Show/hide

Query:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA
        LL PL+      F   S I I  + H +R LS+  LKSFGDK+I EQ FM RD LDA      VLKFEIGT NI +  LE+LLIQFK+VAKVGE +N+EA
Subjt:  LLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEA

Query:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKLHYN
        CMD+MDLLYEKE+TS+ Y S  SLAA+ILV+SY+ITVP Q++EFP++PW K+  N
Subjt:  CMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKLHYN

Sequences

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CDS sequence

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ATGGCTCAAGATATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTATTTCCTTATGGATATCTAGCAAAGTTAGTTCTTCTTTCTCCTCTTTC
TGGAGATGAGTGCCTTACTTTTTCATATAATTCAACTATACTAATTCTTTTGCAGTTTCACACTTCTCGTCCTCTTTCTATAAAACTTCTGAAATCTTTTGGGGATAAGA
TGATTAAGGAACAACATTTTATGACACGGGATTTATTGGATGCAGTATTGAAGTTCGAGATTGGTACTGCAAATATCACTTTTATATTTCTTGAGGAACTTCTTATTCAA
TTCAAGAAAGTAGCCAAAGTTGGGGAGCTTGTGAACTGGGAAGCGTGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTTTTACAGTTCTCCTTG
TTCTTTAGCTGCTGCCATCTTGGTTGCTTCATATCTCATCACTGTTCCAGTTCAAGAATGGGAATTTCCAGTTGTTCCCTGGGGTAAGTTGCATTACAATTCATCTCTCC
TTTTTGTTGAGCATGGATAG

mRNA sequence

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Protein sequence

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MAQDIGFCNQSQKAICSYLHLFPYGYLAKLVLLSPLSGDECLTFSYNSTILILLQFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQ
FKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILVASYLITVPVQEWEFPVVPWGKLHYNSSLLFVEHG

HG10006857 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome