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HG10006874 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006874
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRemorin_C domain-containing protein
Genome locationChr07:22838672..22838860
RNA-Seq ExpressionHG10006874
SyntenyHG10006874
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0010033 - response to organic substance (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648078.1 hypothetical protein Csa_018858 [Cucumis sativus]8.4e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

XP_004140405.1 uncharacterized protein LOC101221140 [Cucumis sativus]8.4e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

XP_008460230.1 PREDICTED: uncharacterized protein LOC103499112 [Cucumis melo]8.4e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

XP_022941921.1 uncharacterized protein LOC111447138 [Cucurbita moschata]1.8e-2191.94Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHD+L NKLAAVRHKAEEKLAAAE KRNRQA IAEQQADYIRQTGRIPSLFSC YCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

XP_038891370.1 uncharacterized protein LOC120080800 [Benincasa hispida]6.5e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        +RGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

TrEMBL top hitse value%identityAlignment
A0A0A0KMA3 Remorin_C domain-containing protein4.1e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

A0A1S3CDA5 uncharacterized protein LOC1034991124.1e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

A0A5D3E2X4 Flocculation protein FLO11 isoform X14.1e-2498.39Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQAD+IRQTGRIPSLFSCFYCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

A0A6J1FMF2 uncharacterized protein LOC1114471388.5e-2291.94Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHD+L NKLAAVRHKAEEKLAAAE KRNRQA IAEQQADYIRQTGRIPSLFSC YCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

A0A6J1ILL9 uncharacterized protein LOC1114774918.5e-2291.94Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS
        MRGQAHD+L NKLAAVRHKAEEKLAAAE KRNRQA IAEQQADYIRQTGRIPSLFSC YCCS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30320.1 Remorin family protein1.4e-0542.62Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCC
        M+ +A  ++  K+A  + ++EEK A AEA++ R A  A  +A YIR+TGRIP+  S   CC
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCC

AT1G67590.1 Remorin family protein5.3e-0850Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFS
        M+ +A ++L NKLAA +  AEE+ A AEAK N +A    ++ADYIR++G +PS FS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFS

AT2G02170.1 Remorin family protein9.3e-1360.32Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPS-LFSCFYCCS
        ++G+A DRL  KLA +  KAEEK AAAEAK++ QAA  E+QA+ IR+TG++PS LFSCF  CS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPS-LFSCFYCCS

AT2G02170.2 Remorin family protein9.3e-1360.32Show/hide
Query:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPS-LFSCFYCCS
        ++G+A DRL  KLA +  KAEEK AAAEAK++ QAA  E+QA+ IR+TG++PS LFSCF  CS
Subjt:  MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPS-LFSCFYCCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCCAAGCACATGATAGGCTTACGAACAAACTAGCGGCAGTGAGGCACAAAGCTGAAGAAAAGCTAGCGGCAGCAGAAGCAAAGAGAAACCGGCAGGCCGCAAT
AGCTGAGCAGCAAGCAGATTATATTCGCCAAACTGGTCGAATTCCTTCTTTATTTTCATGCTTCTATTGTTGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGCCAAGCACATGATAGGCTTACGAACAAACTAGCGGCAGTGAGGCACAAAGCTGAAGAAAAGCTAGCGGCAGCAGAAGCAAAGAGAAACCGGCAGGCCGCAAT
AGCTGAGCAGCAAGCAGATTATATTCGCCAAACTGGTCGAATTCCTTCTTTATTTTCATGCTTCTATTGTTGCTCTTGA
Protein sequenceShow/hide protein sequence
MRGQAHDRLTNKLAAVRHKAEEKLAAAEAKRNRQAAIAEQQADYIRQTGRIPSLFSCFYCCS