; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006894 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006894
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHomeodomain-like superfamily protein
Genome locationChr07:23051539..23051861
RNA-Seq ExpressionHG10006894
SyntenyHG10006894
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601716.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2586.76Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRGVVRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+L+LMDVKG+SISHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

KAG7032464.1 putative Myb family transcription factor [Cucurbita argyrosperma subsp. argyrosperma]6.8e-2586.76Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRGVVRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+L+LMDVKG+SISHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

XP_022929947.1 myb family transcription factor PHL6-like [Cucurbita moschata]1.2e-2485.29Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRG VRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+LQLMDVKG+S+SHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

XP_022991492.1 putative Myb family transcription factor At1g14600 [Cucurbita maxima]3.0e-2588.24Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRGVVRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+LQLMDVKG+SISHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

XP_023516803.1 putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo]3.0e-2588.24Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRGVVRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+LQLMDVKG+SISHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

TrEMBL top hitse value%identityAlignment
A0A0A0KSV1 SANT domain-containing protein2.9e-2180.3Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        G VRQYIRSK PRLRWTP LH+SF+LAI+ LGG QKATPKLVLQLMDVKGL+ISHVKSHLQ++ S+
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

A0A1S4E2S3 putative Myb family transcription factor At1g146002.9e-2180.3Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        G VRQYIRSK PRLRWTP LH+SF+LAI+ LGG QKATPKLVLQLMDVKGL+ISHVKSHLQ++ S+
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

A0A6J1E1Y6 putative Myb family transcription factor At1g146005.8e-2280.3Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        G VRQY+RSK PRLRWTP+LH+SF+LAIQ+LGG QKATPKLVLQLMDVKGL+ISHVKSHLQ++ S+
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

A0A6J1EP17 myb family transcription factor PHL6-like5.6e-2585.29Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRG VRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+LQLMDVKG+S+SHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

A0A6J1JLZ1 putative Myb family transcription factor At1g146001.5e-2588.24Show/hide
Query:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        MRGVVRQY+RSKTPRLRWTPQLHNSFLLAIQSLGG QKATPKL+LQLMDVKG+SISHVKSHLQ++ S+
Subjt:  MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

SwissProt top hitse value%identityAlignment
A0A0P0X0C0 Myb family transcription factor MPH12.1e-1660.32Show/hide
Query:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS
        VRQY RS+ PR+RWT ++H  F+ A++ LGG  +ATPK +LQLM VKG+SISH+KSHLQ++ S
Subjt:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS

A3AWH5 Myb family transcription factor MOF15.2e-2074.6Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF
        G VRQYIRSK PRLRWT +LH SF+ AI+ LGG  KATPKL+LQLM VKGL+ISHVKSHLQ++
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF

Q700D9 Putative Myb family transcription factor At1g146003.4e-1969.84Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF
        G VR Y+RS  PRLRWTP+LH SF+ A+  LGG  KATPKLVL++MDVKGL+ISHVKSHLQ++
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF

Q93WJ9 Transcription repressor KAN14.0e-1254.39Show/hide
Query:  KTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        + PR+RWT  LH  F+ A++ LGG ++ATPK VL+LMDVK L+++HVKSHLQ++ ++
Subjt:  KTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

Q9C616 Probable transcription factor KAN25.2e-1254.39Show/hide
Query:  KTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL
        + PR+RWT  LH  F+ A++ LGG ++ATPK VL+LMDVK L+++HVKSHLQ++ ++
Subjt:  KTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSL

Arabidopsis top hitse value%identityAlignment
AT1G14600.1 Homeodomain-like superfamily protein2.4e-2069.84Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF
        G VR Y+RS  PRLRWTP+LH SF+ A+  LGG  KATPKLVL++MDVKGL+ISHVKSHLQ++
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF

AT2G02060.1 Homeodomain-like superfamily protein5.9e-1967.21Show/hide
Query:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF
        VR Y+RS  PRLRWTP LH  F+ A++ LGG  +ATPKLVL++MDVKGL+ISHVKSHLQ++
Subjt:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVF

AT2G38300.1 myb-like HTH transcriptional regulator family protein2.7e-1965.08Show/hide
Query:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS
        VR Y+RSK PRLRWTP LH  F+ A++ LGG ++ATPKLV Q+M++KGLSI+HVKSHLQ++ S
Subjt:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS

AT2G40260.1 Homeodomain-like superfamily protein4.8e-2172.31Show/hide
Query:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS
        G VR Y RSKTPRLRWTP+LH  FL A++ LGG  +ATPKLVLQLM+VKGLSI+HVKSHLQ++ S
Subjt:  GVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS

AT2G42660.1 Homeodomain-like superfamily protein4.1e-2069.84Show/hide
Query:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS
        VRQYIRS  PRLRWTP LH SF+ A+Q LGG  +ATPKLVL++M++KGLSI+HVKSHLQ++ S
Subjt:  VRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTGTTGTTAGACAGTACATTAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATAACTCTTTCCTTCTTGCCATTCAATCCCTTGGTGGCCTTCA
AAAGGCAACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGTCTCTCAATATCACATGTTAAGAGTCATCTTCAGGTCTTCAGTTCTCTCAACTTTTATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTGTTGTTAGACAGTACATTAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATAACTCTTTCCTTCTTGCCATTCAATCCCTTGGTGGCCTTCA
AAAGGCAACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGTCTCTCAATATCACATGTTAAGAGTCATCTTCAGGTCTTCAGTTCTCTCAACTTTTATTTTTAA
Protein sequenceShow/hide protein sequence
MRGVVRQYIRSKTPRLRWTPQLHNSFLLAIQSLGGLQKATPKLVLQLMDVKGLSISHVKSHLQVFSSLNFYF