CuGenDBv2

Gene ID	HG10006902
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytochrome c
Genome location	Chr07:23155336..23157318
RNA-Seq Expression	HG10006902
Synteny	HG10006902
Gene Ontology terms	GO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process) GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0010336 - gibberellic acid homeostasis (biological process) GO:0005758 - mitochondrial intermembrane space (cellular component) GO:0070469 - respirasome (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR002327 - Cytochrome c, class IA/ IB IPR036909 - Cytochrome c-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008452381.1 PREDICTED: cytochrome c [Cucumis melo]

2.2e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

XP_011095631.1 cytochrome c [Sesamum indicum]

2.2e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

XP_021288081.1 cytochrome c [Herrania umbratica]

2.2e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

XP_038893188.1 cytochrome c [Benincasa hispida]

2.2e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

XP_039028637.1 cytochrome c [Hibiscus syriacus]

2.2e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

TrEMBL top hits

e value

%identity

Alignment

A0A0B2QL57 Cytochrome c

1.1e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

A0A5D3DTP9 Cytochrome c

1.1e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

A0A6P5WWC6 cytochrome c-like

1.1e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

C6SZC5 Cytochrome c domain-containing protein

1.1e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

C6TJ91 Cytochrome c domain-containing protein

1.1e-19

100

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

SwissProt top hits

e value

%identity

Alignment

P00051 Cytochrome c

5.5e-21

95.83

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Query:  AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Subjt:  AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

P00052 Cytochrome c

6.5e-22

97.96

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

P00053 Cytochrome c

7.2e-21

89.8

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAV W++KTLYDYLLNPKKYIPGTKMVFPGLKKP++RADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

P00062 Cytochrome c

9.4e-21

93.88

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK+STA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

P00064 Cytochrome c

5.5e-21

89.8

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAV+W++ TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

Arabidopsis top hits

e value

%identity

Alignment

AT1G22840.1 CYTOCHROME C-1

4.3e-21

93.75

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Query:  AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Subjt:  AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

AT4G10040.1 cytochrome c-2

8.7e-22

93.88

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Query:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA
        MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE TA
Subjt:  MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

Sequences

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CDS sequence

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ATGGCTGTGATATGGGAAGAAAAGACGTTGTATGATTACTTGCTTAACCCCAAGAAGTATATTCCCGGAACAAAGATGGTTTTCCCTGGGCTGAAGAAACCGCAGGAACG
TGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA

mRNA sequence

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ATGGCTGTGATATGGGAAGAAAAGACGTTGTATGATTACTTGCTTAACCCCAAGAAGTATATTCCCGGAACAAAGATGGTTTTCCCTGGGCTGAAGAAACCGCAGGAACG
TGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA

Protein sequence

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MAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA

HG10006902 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome