; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006911 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006911
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSplicing factor YJU2
Genome locationChr07:23222154..23229653
RNA-Seq ExpressionHG10006911
SyntenyHG10006911
Gene Ontology termsGO:0000349 - generation of catalytic spliceosome for first transesterification step (biological process)
GO:0071006 - U2-type catalytic step 1 spliceosome (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007590 - Saf4/Yju2 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577830.1 Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]9.0e-13278.42Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                                  +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        N SNNYV+RI DDEFD+++HFVQH TNND+T  F AKKQK+SE  PHDPTNTSTKA VLH+LTGEG DGNV TSS +KFVS SL VRVSIIKKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL VQ +DTNTGLESLCQY  SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

KAG7015867.1 Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-13279.38Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                               TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGA
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGA

Query:  TRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVFNNSN
        TRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVFN SN
Subjt:  TRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVFNNSN

Query:  NYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARVENKQ
        NYV+RI DDEFD+++HFVQH TNND+T  F AKKQK+SE  PHDPTNTSTKA VLH+LTGEG DGNV TSS +KFVS SL VRVSIIKKPELTARVENKQ
Subjt:  NYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARVENKQ

Query:  SLGVQNNDTNTGLESLCQYSDSDED
        SL VQ +DTNTGLESLCQY  SDED
Subjt:  SLGVQNNDTNTGLESLCQYSDSDED

XP_022965295.1 coiled-coil domain-containing protein 94 homolog [Cucurbita maxima]3.4e-13178.42Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                                  +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSMLVALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNSNNYV+RI DDEFD+++HFVQH T+ND+T  F AKKQK+SE  PHDPTNTSTKA VLH+L GEG DGNV TSS +KFVS SL VRVSIIKKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL VQ +DTNTGLESLCQY  SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

XP_023552633.1 coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]1.5e-13178.42Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                                  +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        N SNNYV+RI DDEFD+++HFVQH TNND+T  F AKKQK+SE  PHDPTNTSTKA VLH+LTGEG DGNV TSS +KFVS SL VRVSIIKKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL VQ +DTNTGLESLCQY  SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

XP_038895471.1 splicing factor YJU2 [Benincasa hispida]1.9e-13481.16Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK                                  TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEA EK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSML+ALQ+T A KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNSNN+V+RI D+EFD+SSHFVQHLTNN KTS F AKKQKVSE SPHDPT+TS KAVVL+SLTGEGKDGNV TSSDAKFVS SL V VSI KKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL +Q+NDTNTGLESLCQY DSDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

TrEMBL top hitse value%identityAlignment
A0A6J1E3A4 Splicing factor YJU29.1e-12275.38Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                                  TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNS +YV+RIPDDEFD+ SHFV   TNNDKTSG +AKKQKV E SPHDPT+TSTKAV+L+SLT EG D +V TS DA+FVS SLS++VSIIKKPELT  V
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        +N+Q+      D NTGL SLCQ   SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

A0A6J1E6Q8 Splicing factor YJU23.7e-13178.12Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                                  +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        N SNNYV+RI DDEFD+++HFVQH TNND+T  F AKKQK+SE  PHDPTNTSTKA VL++LTGEG DGNV TSS +KFVS SL VRVSIIKKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL VQ +DTNTGLESLCQY  SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

A0A6J1EW00 Splicing factor YJU21.9e-12475.38Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                                  TYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDE SEK+KHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNSNNYVKRI DD+FD+SS   Q  TNNDKTS  NAKKQK+SE SPHD   T+TK  +LHSLTGEG DGN  TS DAK +S SLS++VSIIKKPELT RV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        E KQ L VQ  DTN GLESLCQ   SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

A0A6J1HNB0 Splicing factor YJU21.6e-13178.42Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                                  +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEK+KHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSMLVALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNSNNYV+RI DDEFD+++HFVQH T+ND+T  F AKKQK+SE  PHDPTNTSTKA VLH+L GEG DGNV TSS +KFVS SL VRVSIIKKPELTARV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        ENKQSL VQ +DTNTGLESLCQY  SDED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

A0A6J1HYT1 Splicing factor YJU21.1e-12475.68Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                                  TYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDE SEK+KHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQQTAA KEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV
        NNSNNYV+RI DD+FD SS   Q  TNNDKTS  NAKKQK+SE SPHD   T+ K V+LHSLTGEG DGN  TSSDAKF+S SLS++VSIIKKPELT RV
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARV

Query:  ENKQSLGVQNNDTNTGLESLCQYSDSDED
        E KQ L VQ  DTN GLESLCQ   S+ED
Subjt:  ENKQSLGVQNNDTNTGLESLCQYSDSDED

SwissProt top hitse value%identityAlignment
A8WHR3 Splicing factor YJU25.6e-3640.18Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q                                   + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  +K + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  + ML   ++    ++++ +EEDE   K ++ 
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESS
              VKR+ D + +E +
Subjt:  NNSNNYVKRIPDDEFDESS

Q54WR5 Splicing factor YJU27.6e-4134.94Show/hide
Query:  MGERKVLNKYYPPDFDPSKLP--RVRRP--------------------------------KNQQMKTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKV++KYYPPDFDPSK+   +V+RP                                +  Q + YLGI+I+RF+ +C +C+AELTIKTDP+NS+YV 
Subjt:  MGERKVLNKYYPPDFDPSKLP--RVRRP--------------------------------KNQQMKTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGATRN+EPW+E DE    +  K   EE  DAM +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q   ++EK  +EED+ L+KSI F
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSN-------------------NYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVS
        NN N                   N +KRI +D+ D+   F    +NN+K +      + +   + ++  N +T ++             ++T+      +
Subjt:  NNSN-------------------NYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVS

Query:  NSLSVRVSIIKKPELTARVENKQSLGVQNNDTNTGLES----LCQYSDSDED
        + L  +V +         V NKQ   +  N+ N+   S    +  YSD +ED
Subjt:  NSLSVRVSIIKKPELTARVENKQSLGVQNNDTNTGLES----LCQYSDSDED

Q9BW85 Splicing factor YJU21.8e-3442.19Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q                                   + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDE
        E GATRNF+  +  +E  ++ + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A+V  ++ML   + +   + ++ +EEDE
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDE

Q9D6J3 Splicing factor YJU21.4e-3442.71Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q                                   + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------------KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDE
        E GATRNF+  +  +E  ++ + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A+V  ++ML   + +    +++ EEEDE
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDE

Q9P7C5 Splicing factor YJU24.8e-2736.16Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----------------------------------QMKT---YLGIQIFRFYFKCTRCSAELTIKTDPQNS
        M ERKVLNKY PPD+DPS  P  ++ K Q                                   + KT   Y  I I RFY +CTRC+AE+T  TDP+++
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----------------------------------QMKT---YLGIQIFRFYFKCTRCSAELTIKTDPQNS

Query:  DYVVESGATRNFEPWREE--DEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTA-------AVKEKKL
        DY  ESGA+RN+EPW E+   E  E +  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +  L++ A         K++K 
Subjt:  DYVVESGATRNFEPWREE--DEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTA-------AVKEKKL

Query:  EEED-EALIKSIVFNNSNNYVKRI
        EEE+ +   KS+  +     ++R+
Subjt:  EEED-EALIKSIVFNNSNNYVKRI

Arabidopsis top hitse value%identityAlignment
AT1G17130.1 Family of unknown function (DUF572)1.8e-7451.31Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+K                                  TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGA+RN+EPWR EDE  +K K KR+AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHA VS+D+ML ALQ+T A K K++EEEDEA+IKSI F
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDES------SHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKK-
              ++RI D+E D+         +         +S   +KK+K +E SP +PT+          LT    +   +    A       SV + +IKK 
Subjt:  NNSNNYVKRIPDDEFDES------SHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKK-

Query:  PELT-------ARVENKQSLGVQNNDTNTGLESLCQYSDSDED
        P+ T       A+ E K+S G      NT L SL Q   SDED
Subjt:  PELT-------ARVENKQSLGVQNNDTNTGLESLCQYSDSDED

AT1G17130.2 Family of unknown function (DUF572)1.2e-7350.29Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK-----------------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDP
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+K                                         TYLGIQIFRFYFKCT+CSAELT+KTDP
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK-----------------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDP

Query:  QNSDYVVESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEA
        QNSDY+VESGA+RN+EPWR EDE  +K K KR+AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHA VS+D+ML ALQ+T A K K++EEEDEA
Subjt:  QNSDYVVESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEA

Query:  LIKSIVFNNSNNYVKRIPDDEFDES------SHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVR
        +IKSI F      ++RI D+E D+         +         +S   +KK+K +E SP +PT+          LT    +   +    A       SV 
Subjt:  LIKSIVFNNSNNYVKRIPDDEFDES------SHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVR

Query:  VSIIKK-PELT-------ARVENKQSLGVQNNDTNTGLESLCQYSDSDED
        + +IKK P+ T       A+ E K+S G      NT L SL Q   SDED
Subjt:  VSIIKK-PELT-------ARVENKQSLGVQNNDTNTGLESLCQYSDSDED

AT2G29430.1 Family of unknown function (DUF572)7.8e-0955.56Show/hide
Query:  KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEP
        +TYLGI+IFRF  +CT  S E+  +TDP+N+D+++ESGATR   P
Subjt:  KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEP

AT2G32050.1 Family of unknown function (DUF572)4.4e-4448.39Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERK LNKYYPP+FDP ++PR+R+PKNQQ K                                  TYLGI+I RFYFKC++C  EL +KTDP+NS YV 
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGAT  ++   EE++          AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +    +E+  +EED ALIKS  F
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDE
               +RI D+E DE
Subjt:  NNSNNYVKRIPDDEFDE

AT3G43250.1 Family of unknown function (DUF572)4.7e-3840.53Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV
        MGERK LNKYYPPDFDP K+ R+++PKNQQ K                                  TYLG++I RFY KCT+C AELTIKTDP+N  Y V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK----------------------------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVV

Query:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF
        ESGA+  +    E+ E  +K+KH+       +A++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +    +E+ +EE  E LIKSI F
Subjt:  ESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTG
               KRI  DE  + ++             F+ KK+K  +    D   + T  ++    TG
Subjt:  NNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTSTKAVVLHSLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAGGAAGGTTCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATGAAGACATATTTGGGAAT
TCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTCACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAGTCAGGAGCCACACGTAATT
TTGAACCATGGCGTGAGGAGGATGAAGCTTCAGAGAAGCAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACGCAATGAAATCTTTGGAAAATAGAACCTTGGATTCC
AAACGGGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAAATGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACAAACTGCCGC
TGTAAAGGAAAAGAAGTTAGAAGAAGAGGATGAGGCATTGATAAAATCAATAGTCTTCAATAACTCAAACAATTATGTTAAAAGAATTCCAGATGATGAATTTGATGAAA
GTAGTCATTTTGTACAACATTTGACCAACAATGACAAAACATCTGGATTTAATGCAAAGAAGCAAAAGGTTTCTGAAGGATCTCCTCATGATCCTACCAATACTTCAACA
AAAGCTGTTGTTCTCCATAGCCTCACGGGTGAAGGTAAAGATGGCAACGTCAAGACGTCTAGTGATGCTAAGTTTGTTTCTAATTCTTTGTCAGTTAGGGTTTCTATTAT
AAAGAAACCAGAATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGGAGTTCAAAACAATGACACGAACACTGGACTCGAGTCATTATGCCAATACTCCGACAGTGACG
AGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAGGAAGGTTCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATGAAGACATATTTGGGAAT
TCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTCACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAGTCAGGAGCCACACGTAATT
TTGAACCATGGCGTGAGGAGGATGAAGCTTCAGAGAAGCAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACGCAATGAAATCTTTGGAAAATAGAACCTTGGATTCC
AAACGGGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAAATGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACAAACTGCCGC
TGTAAAGGAAAAGAAGTTAGAAGAAGAGGATGAGGCATTGATAAAATCAATAGTCTTCAATAACTCAAACAATTATGTTAAAAGAATTCCAGATGATGAATTTGATGAAA
GTAGTCATTTTGTACAACATTTGACCAACAATGACAAAACATCTGGATTTAATGCAAAGAAGCAAAAGGTTTCTGAAGGATCTCCTCATGATCCTACCAATACTTCAACA
AAAGCTGTTGTTCTCCATAGCCTCACGGGTGAAGGTAAAGATGGCAACGTCAAGACGTCTAGTGATGCTAAGTTTGTTTCTAATTCTTTGTCAGTTAGGGTTTCTATTAT
AAAGAAACCAGAATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGGAGTTCAAAACAATGACACGAACACTGGACTCGAGTCATTATGCCAATACTCCGACAGTGACG
AGGATTGA
Protein sequenceShow/hide protein sequence
MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEKQKHKRNAEEMGDAMKSLENRTLDS
KREMDILAALDEMKSMKSRHANVSIDSMLVALQQTAAVKEKKLEEEDEALIKSIVFNNSNNYVKRIPDDEFDESSHFVQHLTNNDKTSGFNAKKQKVSEGSPHDPTNTST
KAVVLHSLTGEGKDGNVKTSSDAKFVSNSLSVRVSIIKKPELTARVENKQSLGVQNNDTNTGLESLCQYSDSDED