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HG10006928 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006928
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncalmodulin-like
Genome locationChr07:23343210..23343731
RNA-Seq ExpressionHG10006928
SyntenyHG10006928
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065465.1 putative calcium-binding protein CML11 [Cucumis melo var. makuwa]3.5e-5972.25Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        MYI KLQASMAMYEA  FIK YEK +GD V VK FN+ VR STQI  QG++PKILKS+DDVA KLS   HI+PT+Q GGK +KS  R L IKSSNM FSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        ++IKEIF+ HD NNDGFL+  ELTK FAFLGS FPFYKACYGM+YADAN DGLISE ELDKL+DYA + IKKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

KAE8648233.1 hypothetical protein Csa_018371 [Cucumis sativus]1.0e-5071.34Show/hide
Query:  MAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSREEIKEIFKC
        MAMYEAS  IK YEK NGD V VKAF++ VR STQI N+  + KILK +D VA KL S  HI+PT++ GGK +KS TRVL  KSSNM  SRE IKEIF+ 
Subjt:  MAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSREEIKEIFKC

Query:  HDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYA
        HD NNDGFL+R ELTK FAFLGS FPFYKACYGM+YADANEDGLISE ELDKL+DYA
Subjt:  HDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYA

XP_022930007.1 uncharacterized protein LOC111436449 [Cucurbita moschata]7.5e-4660.12Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        M+I KLQASMA YEAS+ IK Y + NGD V +K+F++I R STQ+NNQG IP+ILK N +V LKLSSN H                     K+S +QFSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E++KEIFK HD + DGFL+ RELTK FAFLGS  PF KA YGM YADAN+DGLISE ELDKL+DYA +F+KKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

XP_022930012.1 calmodulin-2/4-like [Cucurbita moschata]2.6e-4660.69Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        M+IPKLQASMA YEAS+ IK     NGD V +KAFN I R STQ+NNQ M+P+IL+ N +V  K SSN H                    +K+SNMQFSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E++KEIF+ HD + DGFL+ RELTK FAFLGS  PF KA YGM YADAN+DGLISE ELDKLVDYA +FIKKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

XP_023530739.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]1.5e-4660.69Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        M+IPKLQASMA YEAS+ IK     NGD V +KAFN I R STQ+NNQGM+P+IL+ N +V  K SSN H                    +K+SNMQFSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E++KEIF+ HD + DGFL+ RELTK FAFLGS  PF KA YGM YADAN+DGLISE ELDKLVDYA +F+KKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KLF3 Uncharacterized protein4.3e-4761.49Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQIN-NQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFS
        M+IP+LQ S A YEASK +K YE+ NG+GV + AFN+  RGSTQIN N+ M  K LK NDDVA KLSSN  +K   QI GK Q    RV   K+SNMQFS
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQIN-NQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFS

Query:  REEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        RE+IKEIF+ +D + DGFL+ RE+TK FA LGS FPF KA +GM+YAD N+DGLI E ELDKL++YA +F+KKK
Subjt:  REEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

A0A0A0KMQ1 Uncharacterized protein1.2e-5771.68Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        MYI KLQASMAMYEAS  IK YEK NGD V VKAF++ VR STQI N+  + KILK +D VA KL S  HI+PT++ GGK +KS TRVL  KSSNM  SR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E IKEIF+ HD NNDGFL+R ELTK FAFLGS FPFYKACYGM+YADANEDGLISE ELDKL+DYA + IKKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

A0A5A7VI66 Putative calcium-binding protein CML111.7e-5972.25Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        MYI KLQASMAMYEA  FIK YEK +GD V VK FN+ VR STQI  QG++PKILKS+DDVA KLS   HI+PT+Q GGK +KS  R L IKSSNM FSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        ++IKEIF+ HD NNDGFL+  ELTK FAFLGS FPFYKACYGM+YADAN DGLISE ELDKL+DYA + IKKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

A0A6J1EP67 uncharacterized protein LOC1114364493.6e-4660.12Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        M+I KLQASMA YEAS+ IK Y + NGD V +K+F++I R STQ+NNQG IP+ILK N +V LKLSSN H                     K+S +QFSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E++KEIFK HD + DGFL+ RELTK FAFLGS  PF KA YGM YADAN+DGLISE ELDKL+DYA +F+KKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

A0A6J1EP72 calmodulin-2/4-like1.3e-4660.69Show/hide
Query:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR
        M+IPKLQASMA YEAS+ IK     NGD V +KAFN I R STQ+NNQ M+P+IL+ N +V  K SSN H                    +K+SNMQFSR
Subjt:  MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSR

Query:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK
        E++KEIF+ HD + DGFL+ RELTK FAFLGS  PF KA YGM YADAN+DGLISE ELDKLVDYA +FIKKK
Subjt:  EEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47480.1 Calcium-binding EF-hand family protein7.6e-0435.21Show/hide
Query:  NMQFSREEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYA-DANEDGLISETELDKLVD
        N    +E +KE F+  D N DGF+D  EL    + LG        C  M+   D N DG I   E  KL++
Subjt:  NMQFSREEIKEIFKCHDINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYA-DANEDGLISETELDKLVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATCCCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTAAGTTTATCAAGGACTATGAAAAAAATAATGGTGATGGTGTTCACGTAAAAGCTTTCAATGA
AATTGTTCGAGGTTCAACTCAAATCAATAATCAAGGAATGATACCGAAGATCCTAAAATCAAACGACGACGTTGCACTCAAGCTTAGCTCCAACGATCATATAAAGCCAA
CTAAGCAAATAGGAGGAAAAACTCAAAAATCCACCACAAGGGTTCTTGGCATTAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATAAAGGAAATTTTCAAGTGTCAT
GACATCAATAATGATGGTTTCCTCGACAGAAGGGAGCTAACAAAAACTTTTGCTTTTCTAGGCTCATTTTTTCCATTCTACAAAGCTTGCTACGGAATGATGTATGCCGA
TGCTAATGAAGATGGTCTTATCAGTGAGACTGAGCTTGACAAACTCGTTGATTATGCATGTAGATTTATCAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATATCCCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTAAGTTTATCAAGGACTATGAAAAAAATAATGGTGATGGTGTTCACGTAAAAGCTTTCAATGA
AATTGTTCGAGGTTCAACTCAAATCAATAATCAAGGAATGATACCGAAGATCCTAAAATCAAACGACGACGTTGCACTCAAGCTTAGCTCCAACGATCATATAAAGCCAA
CTAAGCAAATAGGAGGAAAAACTCAAAAATCCACCACAAGGGTTCTTGGCATTAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATAAAGGAAATTTTCAAGTGTCAT
GACATCAATAATGATGGTTTCCTCGACAGAAGGGAGCTAACAAAAACTTTTGCTTTTCTAGGCTCATTTTTTCCATTCTACAAAGCTTGCTACGGAATGATGTATGCCGA
TGCTAATGAAGATGGTCTTATCAGTGAGACTGAGCTTGACAAACTCGTTGATTATGCATGTAGATTTATCAAGAAGAAATAA
Protein sequenceShow/hide protein sequence
MYIPKLQASMAMYEASKFIKDYEKNNGDGVHVKAFNEIVRGSTQINNQGMIPKILKSNDDVALKLSSNDHIKPTKQIGGKTQKSTTRVLGIKSSNMQFSREEIKEIFKCH
DINNDGFLDRRELTKTFAFLGSFFPFYKACYGMMYADANEDGLISETELDKLVDYACRFIKKK