; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006957 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006957
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionsquamous cell carcinoma antigen recognized by T-cells 3
Genome locationChr07:23618008..23624351
RNA-Seq ExpressionHG10006957
SyntenyHG10006957
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK15070.1 squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo var. makuwa]5.3e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

XP_008460582.1 PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo]5.3e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

XP_016902571.1 PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis melo]5.3e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

XP_038876547.1 squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Benincasa hispida]3.5e-10593.06Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE  ESNAEIP+ TN+DEGN+VNGDEPMPDLPQNPTS ASDSSSSDSDSEDDESDQKLQLQSLQSQLSS+PSNYDAHVQCIKLLRKIGDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPLTP MWQEWAKDEASI+TGPEALAAIERLYERGVFDYLSVSLW DYLNF+QEYD LVQ+CATSG+KKARDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETDTQ
Subjt:  DFEKAIYQTIAETDTQ

XP_038876548.1 squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Benincasa hispida]3.5e-10593.06Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE  ESNAEIP+ TN+DEGN+VNGDEPMPDLPQNPTS ASDSSSSDSDSEDDESDQKLQLQSLQSQLSS+PSNYDAHVQCIKLLRKIGDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPLTP MWQEWAKDEASI+TGPEALAAIERLYERGVFDYLSVSLW DYLNF+QEYD LVQ+CATSG+KKARDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETDTQ
Subjt:  DFEKAIYQTIAETDTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KP58 Uncharacterized protein2.0e-9887.1Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I S AE PLPTNSD+G  VNGDEPMPDLPQNP    +DSSSSDSDSEDDES+Q L LQSLQSQLSSNPS+YDAHVQ IK+LRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPLTPSMWQEWA+DEASI+TGPEALAAIERLYERGVFDYLSVS W DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQV
        D EK+IYQTIAETD QV
Subjt:  DFEKAIYQTIAETDTQV

A0A1S3CCC2 squamous cell carcinoma antigen recognized by T-cells 3 isoform X12.6e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

A0A1S4E2W5 squamous cell carcinoma antigen recognized by T-cells 3 isoform X22.6e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

A0A5D3CUH2 Squamous cell carcinoma antigen recognized by T-cells 3 isoform X12.6e-10190.28Show/hide
Query:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA
        MDE I SNAE PLPTNSD+GN VNGDEPMPDLPQNP    SDSSSSDSDSEDDES+Q LQL SLQSQLSSN S+YDAHVQ IKLLRK+GDIDNLRKAREA
Subjt:  MDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREA

Query:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR
        MSEIFPL+PSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLW DYLNFI+EYDPLVQDCATSGIKK RDLFERALTAAGLHFTEAEKLWEAYR
Subjt:  MSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYR

Query:  DFEKAIYQTIAETDTQ
        DFEKAIYQTIAETD Q
Subjt:  DFEKAIYQTIAETDTQ

A0A6J1FHD1 squamous cell carcinoma antigen recognized by T-cells 31.3e-9787.56Show/hide
Query:  NAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPL
        NA++PL TNSD+ N+VNGD+PMPDLPQNPTS ASDSSSSDSDSE DESDQKLQLQ+LQS+LSSNPSNYDAHVQ IKLLRK+GDIDNLRKAREAMSE+FPL
Subjt:  NAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPL

Query:  TPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIY
        TPSMWQEWAKDEASI+TGPE +AAIERLYERGVFDYLSVSLWCDYLNF+QEYDP+V+D ATS IKKARDLFERALTAAGLHFTEAEKLWEAYR+FEK+IY
Subjt:  TPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIY

Query:  QTIAETDTQ
        Q+I ETDTQ
Subjt:  QTIAETDTQ

SwissProt top hitse value%identityAlignment
B3DJT0 Squamous cell carcinoma antigen recognized by T-cells 31.9e-2935.86Show/hide
Query:  LPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMW
        LP   +E   +  +    D  +            + D+ +DE + + ++Q L+ QLS N  +Y+ HV  IKLLR+ G +  LRKAR+ MSE+FPLT  +W
Subjt:  LPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMW

Query:  QEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTI
         +W KDE  I         +  L+ER + DY+   +W +Y+ +      +    A  GI++ R +FERALTA GLH T+   +WEAYR+FE  I  T+
Subjt:  QEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTI

Q15020 Squamous cell carcinoma antigen recognized by T-cells 31.3e-2538.73Show/hide
Query:  SAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERL
        +++++SS  + + E DE ++K  L+++ L+ QLS N  +Y+ HV  I+LLR  G++  +R AR+ MSEIFPLT  +W EW  DE S+         +  L
Subjt:  SAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERL

Query:  YERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ
        +E+ V DY+  ++W +Y  +      + Q     G++K R +FERAL++ GLH T+   LWEAYR+FE AI +
Subjt:  YERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ

Q5REG1 Squamous cell carcinoma antigen recognized by T-cells 31.3e-2538.73Show/hide
Query:  SAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERL
        +++++SS  + + E DE ++K  L+++ L+ QLS N  +Y+ HV  I+LLR  G++  +R AR+ MSEIFPLT  +W EW  DE S+         +  L
Subjt:  SAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERL

Query:  YERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ
        +E+ V DY+  ++W +Y  +      + Q     G++K R +FERAL++ GLH T+   LWEAYR+FE AI +
Subjt:  YERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ

Q9JLI8 Squamous cell carcinoma antigen recognized by T-cells 33.4e-2636.9Show/hide
Query:  NGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEAS
        +GDE      ++  +++++SS+ + + E DE ++K  L+++ L+ QLS N  +Y+ HV+ I+LLR  G++  +R AR+ MSE+FPLT  +W EW  DE S
Subjt:  NGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQK--LQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEAS

Query:  INTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ
        +         +  L+ER V DY+  ++W +Y  +      + Q     G++K R +FERAL++ GLH T+   +WEAYR+FE AI +
Subjt:  INTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQ

Q9USY2 Uncharacterized RNA-binding protein C1861.04c3.0e-1426.55Show/hide
Query:  DSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSV
        D D ++    + L L  L      +P NYD+H++ I+ L+++     L +AR+    IFPL+  +W ++  DE       +    I+ L++  V DYLS+
Subjt:  DSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSV

Query:  SLWCDYLNF---IQEYDPLVQDCATSG----IKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ
         +WC YL F   + +     Q+ +       +  A  LFERA      HF++++ +W  Y +F +     + E + +
Subjt:  SLWCDYLNF---IQEYDPLVQDCATSG----IKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ

Arabidopsis top hitse value%identityAlignment
AT4G24270.1 EMBRYO DEFECTIVE 1401.6e-5053Show/hide
Query:  IVNGDEPMPDL-PQNPTSA----ASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWA
        + N D+ M D   +NP  A    + DS  SDSDSE DE++   Q+ +L+S+LS+NP NYDA+VQ IKLLRK  +++ LR+AREAMS IFPL+PS+W EWA
Subjt:  IVNGDEPMPDL-PQNPTSA----ASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWA

Query:  KDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ
        +DEAS+    E +  I  LYERG+ DY SVSLWCDYL+F+ E+DP V+   + GI K R LFERA+ AAG H TE  ++WE YR+FE+ +  TI E D +
Subjt:  KDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ

AT4G24270.2 EMBRYO DEFECTIVE 1401.6e-5053Show/hide
Query:  IVNGDEPMPDL-PQNPTSA----ASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWA
        + N D+ M D   +NP  A    + DS  SDSDSE DE++   Q+ +L+S+LS+NP NYDA+VQ IKLLRK  +++ LR+AREAMS IFPL+PS+W EWA
Subjt:  IVNGDEPMPDL-PQNPTSA----ASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDAHVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWA

Query:  KDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ
        +DEAS+    E +  I  LYERG+ DY SVSLWCDYL+F+ E+DP V+   + GI K R LFERA+ AAG H TE  ++WE YR+FE+ +  TI E D +
Subjt:  KDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGLHFTEAEKLWEAYRDFEKAIYQTIAETDTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGTAGTACTCGGAGGCAGAGCCCACTTCCATTGATTGAACTTCCTAATGACCCCCTCCTCAAAACTCAGGCCTCTGTCCCAAAGTCCGACGCCATGGACGAAGC
CATTGAATCCAACGCCGAAATTCCACTTCCAACTAACTCAGACGAAGGAAATATTGTAAATGGAGATGAACCAATGCCCGACCTTCCTCAGAATCCCACCTCCGCCGCCT
CCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCGACCAAAAGCTCCAACTCCAGTCTCTTCAATCTCAGCTTTCCTCCAACCCCTCCAACTACGATGCT
CATGTCCAATGTATAAAGCTTTTGAGGAAAATTGGTGACATTGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTCCCATTGACCCCATCAATGTGGCAGGA
ATGGGCCAAGGACGAAGCATCTATCAATACTGGACCTGAGGCCCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCGGTTTCTCTATGGTGTG
ACTACTTAAATTTCATTCAAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGCTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTG
CATTTCACTGAGGCTGAAAAATTGTGGGAAGCATATAGAGATTTTGAGAAAGCCATATATCAAACCATTGCTGAAACTGATACTCAGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACGTAGTACTCGGAGGCAGAGCCCACTTCCATTGATTGAACTTCCTAATGACCCCCTCCTCAAAACTCAGGCCTCTGTCCCAAAGTCCGACGCCATGGACGAAGC
CATTGAATCCAACGCCGAAATTCCACTTCCAACTAACTCAGACGAAGGAAATATTGTAAATGGAGATGAACCAATGCCCGACCTTCCTCAGAATCCCACCTCCGCCGCCT
CCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCGACCAAAAGCTCCAACTCCAGTCTCTTCAATCTCAGCTTTCCTCCAACCCCTCCAACTACGATGCT
CATGTCCAATGTATAAAGCTTTTGAGGAAAATTGGTGACATTGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTCCCATTGACCCCATCAATGTGGCAGGA
ATGGGCCAAGGACGAAGCATCTATCAATACTGGACCTGAGGCCCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCGGTTTCTCTATGGTGTG
ACTACTTAAATTTCATTCAAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGCTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTG
CATTTCACTGAGGCTGAAAAATTGTGGGAAGCATATAGAGATTTTGAGAAAGCCATATATCAAACCATTGCTGAAACTGATACTCAGGTCTAA
Protein sequenceShow/hide protein sequence
MTRSTRRQSPLPLIELPNDPLLKTQASVPKSDAMDEAIESNAEIPLPTNSDEGNIVNGDEPMPDLPQNPTSAASDSSSSDSDSEDDESDQKLQLQSLQSQLSSNPSNYDA
HVQCIKLLRKIGDIDNLRKAREAMSEIFPLTPSMWQEWAKDEASINTGPEALAAIERLYERGVFDYLSVSLWCDYLNFIQEYDPLVQDCATSGIKKARDLFERALTAAGL
HFTEAEKLWEAYRDFEKAIYQTIAETDTQV