CuGenDBv2

Gene ID	HG10007013
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Genome location	Chr10:333891..334088
RNA-Seq Expression	HG10007013
Synteny	HG10007013
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR042106 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ

Homology

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GenBank top hits

e value

%identity

Alignment

QHB76018.1 NADH dehydrogenase subunit 6 [Cucumis melo subsp. melo]

2.3e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

QJD26524.1 NdhG [Trichosanthes kirilowii var. japonica]

2.3e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

YP_009525238.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa]

2.3e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

YP_009752547.1 NADH dehydrogenase subunit G [Trichosanthes tubiflora]

2.3e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

YP_009752972.1 NADH dehydrogenase subunit G [Momordica sessilifolia]

2.3e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LEC8 NADH dehydrogenase subunit 6

1.1e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

A0A1X9Q1H7 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.1e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

A0A218KG81 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.1e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

A0A6H0ET31 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.1e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

A0A6M3S4I4 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.1e-24

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

SwissProt top hits

e value

%identity

Alignment

Q09MC3 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.6e-23

86.15

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        +TTI+DTSWYGIIWTTR+NQI+EQDLISNSQQ GI+LST FFLPFEL+SIILL ALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Q0ZIW5 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

5.4e-24

89.23

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        +TTI+DTSWYGIIWTTRSNQI+EQDLISNSQQ GI+LST FFLPFELISIILL ALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Q2QD38 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

3.0e-27

98.46

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQ GIYLSTYFFLPFELISIILLAALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Q49KU5 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

1.2e-23

87.69

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        MTTI+DTSWYGIIWTT+SNQI+EQDLI NSQQ GI+LST FFLPFELISIILL ALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Q68RV3 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

2.7e-23

87.69

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        +TTI DTSWYGIIWTT+SNQI+EQDLISNSQQ GI+LST FFLPFELISIILL ALIGAIAVARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Arabidopsis top hits

e value

%identity

Alignment

ATCG01080.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6

7.2e-24

84.62

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Query:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ
        M+TI+DTSWYG+IWTT+ NQILEQDLISNSQQ GI+LST FFLPFELISIILL ALIGAI+VARQ
Subjt:  MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Sequences

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CDS sequence

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ATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAGATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAAATGGAATTTATTT
ATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGTCAGTAA

mRNA sequence

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ATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAGATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAAATGGAATTTATTT
ATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGTCAGTAA

Protein sequence

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MTTIVDTSWYGIIWTTRSNQILEQDLISNSQQNGIYLSTYFFLPFELISIILLAALIGAIAVARQ

HG10007013 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome