CuGenDBv2

Gene ID	HG10007053
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	serine/arginine-rich splicing factor 11
Genome location	Chr10:841173..844090
RNA-Seq Expression	HG10007053
Synteny	HG10007053
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

3.4e-59

86.26

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRRTRREKDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSES+Y+ SNSSS+SEPETS RSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

8.6e-55

82.42

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAA+SS+ TS +SDSSSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSS+DSES+YS    SS+SEPETS RSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

8.3e-58

84.7

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSSS TS+TSDSSSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSES YS S SSSQSEPETSGRSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKE               FLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

7.8e-56

83.52

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAA+SS+ TS +SDSSSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSS+DSES+YS  NSSS+SEPETS RSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

2.1e-61

88.46

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSSS TSYTSDSSSSSSRRRRRRR RREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSES+YS +NSSSQSEPETSGRSKRHK+NDRAK+DK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

4.2e-55

82.42

Show/hide

Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAA+SS+ TS +SDSSSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSS+DSES+YS    SS+SEPETS RSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

1.6e-59

86.26

Show/hide

Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRRTRREKDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSES+Y+ SNSSS+SEPETS RSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKE              FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE--------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

4.0e-58

84.7

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSSS TS+TSDSSSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSES YS S SSSQSEPETSGRSKRHKKNDR KKDK
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKE               FLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

7.3e-52

81.97

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Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSSS + YTSDSSSSSSRRRRRRRTRREKDRD LR+RKKSRSHSKR RRHRRSSS+SLSSSDSES+YS S+SSSQSEPE SGRSKRHKKND  K  K
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+S HHKRRKHKAKE               FLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

2.8e-51

81.42

Show/hide

Query:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK
        MAASSSS + YTSDSSSSSSRRRRRRRTRREKDRD LR+RKKSRSHSKR RRHRRSSS+SLSSSDSES+YS S+SSSQSEPE SGRSKRHKKND  KK  
Subjt:  MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDK

Query:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         RERS+S HHKRRKHKAKE               FLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKE---------------FLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

5.6e-28

58.38

Show/hide

Query:  MAASSSSVTSYTSDSSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKK
        MAASSSS +S  S  SS S RRR  RR   R ++DRD+L+VRKKSRS SK+ RR R+ SSDS  SS S+S    S+ SS SE E   +S+RHKK+++ KK
Subjt:  MAASSSSVTSYTSDSSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKK

Query:  DKERERSRSHHHKRRKH---------------KAKEFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERS+SH HKR K+               K  +FL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSRSHHHKRRKH---------------KAKEFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein

5.6e-28

58.38

Show/hide

Query:  MAASSSSVTSYTSDSSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKK
        MAASSSS +S  S  SS S RRR  RR   R ++DRD+L+VRKKSRS SK+ RR R+ SSDS  SS S+S    S+ SS SE E   +S+RHKK+++ KK
Subjt:  MAASSSSVTSYTSDSSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKK

Query:  DKERERSRSHHHKRRKH---------------KAKEFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERS+SH HKR K+               K  +FL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSRSHHHKRRKH---------------KAKEFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCATCTTCCTCTGTGACATCTTACACTTCCGATTCATCGTCTTCTTCTTCTCGTCGTCGTCGCCGCCGAAGAACTCGCCGTGAAAAAGATCGGGACACGCT
TAGGGTTCGCAAGAAGTCTCGTTCTCATTCTAAACGCCATCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTCTCTTCCTCCGACTCAGAATCCAATTACTCCGGAAGCA
ATAGCTCTTCTCAAAGTGAGCCTGAAACGTCGGGCCGTTCAAAGCGGCATAAGAAGAATGATAGAGCAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGCCATCACCAT
AAAAGGCGTAAGCATAAAGCTAAAGAGTTTTTAGCGCGGGAGAAGGATGATGGTACACGGCGGAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAA
GGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

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Protein sequence

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MAASSSSVTSYTSDSSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHRRHRRSSSDSLSSSDSESNYSGSNSSSQSEPETSGRSKRHKKNDRAKKDKERERSRSHHH
KRRKHKAKEFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

HG10007053 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome