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HG10007098 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007098
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRoot phototropism protein 3-like isoform X1
Genome locationChr10:1217458..1217991
RNA-Seq ExpressionHG10007098
SyntenyHG10007098
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050878.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]5.6e-8186.44Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +T+YGGSNYWPYRMKLTTDQLRWDSLKISE+KQFEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETF+VKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDK  SHSTAK++GKSY  KEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

KAG6590385.1 hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sororia]7.4e-6572.73Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+I+ IYGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++L+NMNE SYR+L EMIPIEISI+DVDICET+KVKLVKKEAFWFEPLPL GEKS 
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM
        K                  K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSKTIDRFDFSVLSS RLS+YNL+
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM

KGN66088.1 hypothetical protein Csa_007428 [Cucumis sativus]2.8e-8086.44Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +TIYGGSNYWPYRMKLTTDQLRWDSLKISE K+FEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETFKVKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDKL SH+TAK SGKS+  KEKKEFVYSIEPFRHIIKKRGLDYQQEIG RWSGSK++DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

TYK10230.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]1.3e-8085.88Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +T+YGGSNYWPYRMKLTTDQLRWDSLKISE+K+FEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETF+VKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDK  SHSTAK++GKSY  KEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

XP_022961362.1 uncharacterized protein LOC111461952 [Cucurbita moschata]9.7e-6572.16Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+I+ IYGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++L+NMNE SYR+L EMIPIEISI+DVDICET+KVKLVKKEAFWFEPLPL GEKS 
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM
        K                  K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSKTIDRFDFS+LSS RLS+YNL+
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM

TrEMBL top hitse value%identityAlignment
A0A0A0LWG5 Uncharacterized protein1.4e-8086.44Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +TIYGGSNYWPYRMKLTTDQLRWDSLKISE K+FEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETFKVKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDKL SH+TAK SGKS+  KEKKEFVYSIEPFRHIIKKRGLDYQQEIG RWSGSK++DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

A0A5A7U6J2 Root phototropism protein 3-like isoform X12.7e-8186.44Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +T+YGGSNYWPYRMKLTTDQLRWDSLKISE+KQFEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETF+VKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDK  SHSTAK++GKSY  KEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

A0A5D3CFT9 Root phototropism protein 3-like isoform X16.1e-8185.88Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+ +T+YGGSNYWPYRMKLTTDQLRWDSLKISE+K+FEEL+ KNMNE SYR+L EMIPIE+SIYDVDICETF+VKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI
        KDK  SHSTAK++GKSY  KEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI

A0A6J1HA02 uncharacterized protein LOC1114619524.7e-6572.16Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+I+ IYGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++L+NMNE SYR+L EMIPIEISI+DVDICET+KVKLVKKEAFWFEPLPL GEKS 
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM
        K                  K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSKTIDRFDFS+LSS RLS+YNL+
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM

A0A6J1HUG6 uncharacterized protein LOC1114679166.1e-6572.73Show/hide
Query:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK
        M++KEE+I+ IYGG NYWPYRMKL+TD+LRWDSLKISE  +FEE++L+NMNE SYR+L EMIPIEISI+DVDICET+KVKLVKKEAFWFEPLPL GEKSK
Subjt:  MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSK

Query:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM
                           K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSKTIDRFDFSVLSS RLSLY L+
Subjt:  KDKLYSHSTAKVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAAAAGAAGAGATTATTAATACCATTTATGGAGGTAGTAACTATTGGCCATATCGGATGAAGTTGACGACCGATCAGTTACGTTGGGATAGCCTCAAGATTTC
AGAAACGAAGCAATTCGAGGAACTGATTTTGAAGAATATGAATGAACGAAGCTATAGAGAATTGGTTGAGATGATCCCTATTGAAATATCAATCTATGATGTTGATATTT
GTGAAACTTTTAAGGTGAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTCTGGCTGGTGAGAAGTCAAAGAAAGATAAGTTGTATTCTCATTCCACTGCA
AAAGTGAGTGGCAAGTCCTATAGTAATAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGTCACATCATAAAGAAACGGGGTCTAGATTATCAACAAGAGAT
TGGTTTGCGTTGGTCGGGTAGCAAAACGATAGATCGGTTTGATTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTATACAACTTGATGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAAAAGAAGAGATTATTAATACCATTTATGGAGGTAGTAACTATTGGCCATATCGGATGAAGTTGACGACCGATCAGTTACGTTGGGATAGCCTCAAGATTTC
AGAAACGAAGCAATTCGAGGAACTGATTTTGAAGAATATGAATGAACGAAGCTATAGAGAATTGGTTGAGATGATCCCTATTGAAATATCAATCTATGATGTTGATATTT
GTGAAACTTTTAAGGTGAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTCTGGCTGGTGAGAAGTCAAAGAAAGATAAGTTGTATTCTCATTCCACTGCA
AAAGTGAGTGGCAAGTCCTATAGTAATAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGTCACATCATAAAGAAACGGGGTCTAGATTATCAACAAGAGAT
TGGTTTGCGTTGGTCGGGTAGCAAAACGATAGATCGGTTTGATTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTATACAACTTGATGATCTAA
Protein sequenceShow/hide protein sequence
MQEKEEIINTIYGGSNYWPYRMKLTTDQLRWDSLKISETKQFEELILKNMNERSYRELVEMIPIEISIYDVDICETFKVKLVKKEAFWFEPLPLAGEKSKKDKLYSHSTA
KVSGKSYSNKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKTIDRFDFSVLSSPRLSLYNLMI