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HG10007132 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007132
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationChr10:1633304..1633915
RNA-Seq ExpressionHG10007132
SyntenyHG10007132
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66555.2 hypothetical protein Csa_007514 [Cucumis sativus]1.2e-4752.94Show/hide
Query:  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFH
        + R+HQ+LEI+RR  H LMF FP QIIHQT P  L  +N  FPL F   + + E  SF  Y+AQL SS NI+S  SE +A  I L+ N+  ++N N SFH
Subjt:  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFH

Query:  IVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRR
        I  ++D++ +TWM PLS  T+Q T N V M + ++IG DLGDC ICL+     N E V+KI  GHVYHE CIL+WLDNS  CPLCRR
Subjt:  IVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRR

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]6.6e-2538.62Show/hide
Query:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------
        P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +IA  + +  D+N + +FHI+A VD+++  W+E        
Subjt:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------

Query:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
                  + P  +      R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLCR+  LPL++
Subjt:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD

XP_022985641.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]2.9e-2536.65Show/hide
Query:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD
        +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     + + +   IYIA++L S NI +  SE+IA +IA    +  +
Subjt:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD

Query:  KNPNESFHIVAVVD-YVKYTWMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL
        ++ + + H+VAVVD  V+  +    ++P  Q                  +   RMEK+EE  E   DLG+C ICL+   C   +V++ P GHVYHESCI 
Subjt:  KNPNESFHIVAVVD-YVKYTWMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL

Query:  KWLDNSHFCPLCRRAILPLQD
        +WLDNS  CPLCR     ++D
Subjt:  KWLDNSHFCPLCRRAILPLQD

XP_023512244.1 RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]2.3e-2537.73Show/hide
Query:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD
        +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     + + +   IYIA +L S N+ +  SEII+ +IA    +  +
Subjt:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD

Query:  KNPNESFHIVAVVDYVKYTWMEPL-SIPTQQPTSNMV----------------RMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILK
        ++ + + H+VAVVD V  +    L ++P +Q  S  V                RMEK+  EE  EDLG+C ICL+   C   +V++ P GHVYHESCI +
Subjt:  KNPNESFHIVAVVDYVKYTWMEPL-SIPTQQPTSNMV----------------RMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILK

Query:  WLDNSHFCPLCRRAILPLQD
        WLDNS  CPLCR     ++D
Subjt:  WLDNSHFCPLCRRAILPLQD

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]6.6e-2538.1Show/hide
Query:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSI----
        P +I+H+T   P   +N +F L  + L +      P+ YI+Q LSS NI     EI+A +IA  ++   ++N   +F I+A VD+ +  WME  SI    
Subjt:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWMEPLSI----

Query:  ------------PTQQPTSNMVRMEKLEEI--GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
                    P  +     V +E++ E+   E+LGDCCICLE   C + +V++IP GHVYHESC+ KWL  ++ CPLCR+  LPL D
Subjt:  ------------PTQQPTSNMVRMEKLEEI--GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD

TrEMBL top hitse value%identityAlignment
A0A0A0LW68 RING-type domain-containing protein7.0e-4952.63Show/hide
Query:  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFH
        + R+HQ+LEI+RR  H LMF FP QIIHQT P  L  +N  FPL F   + + E  SF  Y+AQL SS NI+S  SE +A  I L+ N+  ++N N SFH
Subjt:  DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDH-ESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFH

Query:  IVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAIL
        I  ++D++ +TWM PLS  T+Q T N V M + ++IG DLGDC ICL+     N E V+KI  GHVYHE CIL+WLDNS  CPLCRR++L
Subjt:  IVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFC-CNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAIL

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like3.2e-2538.62Show/hide
Query:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------
        P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +IA  + +  D+N + +FHI+A VD+++  W+E        
Subjt:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------

Query:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
                  + P  +      R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLCR+  LPL++
Subjt:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein3.2e-2538.62Show/hide
Query:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------
        P QI+HQT   P  N  V   L          +  P+ YI Q LSS NI    S+ +A +IA  + +  D+N + +FHI+A VD+++  W+E        
Subjt:  PSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPI-YIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFHIVAVVDYVKYTWME--------

Query:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
                  + P  +      R E+L  EE  EDLGDC ICL+   C + +V++IP GHVYHESCI KWL N + CPLCR+  LPL++
Subjt:  --------PLSIPTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD

A0A6J1FXN0 RING-H2 finger protein ATL16-like3.2e-2538.01Show/hide
Query:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD
        +  D H D DE+    LEI+ R    L+    +QI+ +TAP PL N+  +FPLP     + + +   IYIA +L S NI +  SE+I+ +IA    +  +
Subjt:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD

Query:  KNPNESFHIVAVVDYVKYTWMEPL-SIPTQQPTSNMV----------------RMEKL---EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL
        ++ + + H+VAVVD V  +    L ++P  Q  S  V                RMEK+   EE  EDLG+C ICL+   C   +V++ P GHVYHESCI 
Subjt:  KNPNESFHIVAVVDYVKYTWMEPL-SIPTQQPTSNMV----------------RMEKL---EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL

Query:  KWLDNSHFCPLCRRAILPLQD
        +WLDNS  CPLCR     ++D
Subjt:  KWLDNSHFCPLCRRAILPLQD

A0A6J1J8T7 RING-H2 finger protein ATL16-like1.4e-2536.65Show/hide
Query:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD
        +  D H D DE+    LE++ R    L+    +QI+ +TAP PL N+  +FPLP     + + +   IYIA++L S NI +  SE+IA +IA    +  +
Subjt:  VYDDGHFD-DERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATD

Query:  KNPNESFHIVAVVD-YVKYTWMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL
        ++ + + H+VAVVD  V+  +    ++P  Q                  +   RMEK+EE  E   DLG+C ICL+   C   +V++ P GHVYHESCI 
Subjt:  KNPNESFHIVAVVD-YVKYTWMEPLSIPTQQ----------------PTSNMVRMEKLEEIGE---DLGDCCICLERFCCNEEKVVKIPSGHVYHESCIL

Query:  KWLDNSHFCPLCRRAILPLQD
        +WLDNS  CPLCR     ++D
Subjt:  KWLDNSHFCPLCRRAILPLQD

SwissProt top hitse value%identityAlignment
Q6AXU4 E3 ubiquitin-protein ligase RNF1814.2e-0645.1Show/hide
Query:  CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD
        C +CL  F   EE V+++P  H++H +CIL WL  ++ CPLCR   LP  D
Subjt:  CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD

Q9C1X4 Uncharacterized RING finger protein P32A8.03c2.4e-0636.84Show/hide
Query:  EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILP
        +E+ ++ G+C IC+E F  N++ V+++P  H +HE+CI  WL  +  C +CR  + P
Subjt:  EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILP

Q9SRM0 RING-H2 finger protein ATL662.4e-0641.94Show/hide
Query:  MVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI
        + R E+ EE  E+  +CCICL  F   E+  V  P  H YH  C+ +WL     CPLCR +I
Subjt:  MVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI

Q9VHI7 E3 ubiquitin-protein ligase Iruka7.1e-0640Show/hide
Query:  EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI
        EE+   +  C IC + F   +E V K+P  H+YHE+CI+ WL+    CP+CR+++
Subjt:  EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c4.9e-0735.8Show/hide
Query:  EPLSIPTQQPTSNMVR--MEKLEEIGED-LGD--CCICLERFCCNEEK-VVKIPSGHVYHESCILKWLDNSHFCPLCRRAI
        +P + P Q P    V+   +  E +  D L D  C IC +    N+EK   K+P GH++ ++C+ KWL+N   CPLCR+ +
Subjt:  EPLSIPTQQPTSNMVR--MEKLEEIGED-LGD--CCICLERFCCNEEK-VVKIPSGHVYHESCILKWLDNSHFCPLCRRAI

Arabidopsis top hitse value%identityAlignment
AT1G18770.1 RING/U-box superfamily protein6.0e-0848.84Show/hide
Query:  CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCR
        C ICLE F     +VV +P GH + + C+LKW + +H CPLCR
Subjt:  CCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCR

AT1G60360.1 RING/U-box superfamily protein3.2e-0934.67Show/hide
Query:  PTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPL
        P  +PT N +   K+  + +  D+  C +C+E F    +   ++P  H+YH+ CI+ WL  ++ CP+CRR  LPL
Subjt:  PTQQPTSNMVRMEKL--EEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPL

AT1G74620.1 RING/U-box superfamily protein4.6e-0839.68Show/hide
Query:  NMVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI
        N + +   EE G     C IC+E +      V K+P  H +H  CI KWL  +H CPLCR +I
Subjt:  NMVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI

AT1G80400.1 RING/U-box superfamily protein6.0e-0844.23Show/hide
Query:  GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI
        GED   CCICL R+  ++E+V ++P  HV+H  C+ KWL  +  CPLC+  +
Subjt:  GEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAI

AT5G37270.1 RING/U-box superfamily protein4.6e-0829.55Show/hide
Query:  LSSCNIDSDVSEIIAG-EIALLVNE--ATD-KNPNESFHIVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGD-----CCICLERFC-CNEE
        L+S +I  D+ E I   E   L++E  A D  +  + F +   V   +   +  +++P++     ++  + +E    DLGD     C ICLE F   +++
Subjt:  LSSCNIDSDVSEIIAG-EIALLVNE--ATD-KNPNESFHIVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGD-----CCICLERFC-CNEE

Query:  KVVKIPS-GHVYHESCILKWLDNSHFCPLCRR
         ++ +P   H++H+SCI +WL     CPLCRR
Subjt:  KVVKIPS-GHVYHESCILKWLDNSHFCPLCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGTGTTTACGATGATGGACATTTCGACGATGAACGTTATCATCAAATCTTAGAAATTCGAAGACGTTTTATCCATTGTCTCATGTTTGAATTTCCTTCTCAAAT
CATCCATCAAACTGCACCATTTCCACTCGGCAATAATAATGTTGTTTTTCCTCTCCCTTTCTATCTTCTCTATGACCATGAATCAATTTCCTTCCCCATCTACATCGCCC
AATTGCTTTCCTCTTGCAACATCGACTCCGACGTTTCCGAAATCATTGCTGGGGAAATCGCCCTCCTCGTCAACGAAGCCACCGACAAAAATCCAAATGAGAGTTTCCAC
ATTGTTGCCGTTGTCGACTATGTCAAATACACCTGGATGGAACCATTATCGATCCCAACGCAGCAGCCGACGAGCAACATGGTGAGGATGGAGAAGTTGGAGGAGATTGG
AGAAGACTTGGGAGATTGTTGTATTTGTTTGGAGAGATTTTGTTGTAATGAGGAGAAGGTGGTAAAGATCCCCAGTGGACATGTGTATCATGAATCATGTATTTTGAAGT
GGTTGGACAATAGTCATTTTTGCCCTTTGTGTAGGAGGGCAATATTGCCACTTCAGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGTGTTTACGATGATGGACATTTCGACGATGAACGTTATCATCAAATCTTAGAAATTCGAAGACGTTTTATCCATTGTCTCATGTTTGAATTTCCTTCTCAAAT
CATCCATCAAACTGCACCATTTCCACTCGGCAATAATAATGTTGTTTTTCCTCTCCCTTTCTATCTTCTCTATGACCATGAATCAATTTCCTTCCCCATCTACATCGCCC
AATTGCTTTCCTCTTGCAACATCGACTCCGACGTTTCCGAAATCATTGCTGGGGAAATCGCCCTCCTCGTCAACGAAGCCACCGACAAAAATCCAAATGAGAGTTTCCAC
ATTGTTGCCGTTGTCGACTATGTCAAATACACCTGGATGGAACCATTATCGATCCCAACGCAGCAGCCGACGAGCAACATGGTGAGGATGGAGAAGTTGGAGGAGATTGG
AGAAGACTTGGGAGATTGTTGTATTTGTTTGGAGAGATTTTGTTGTAATGAGGAGAAGGTGGTAAAGATCCCCAGTGGACATGTGTATCATGAATCATGTATTTTGAAGT
GGTTGGACAATAGTCATTTTTGCCCTTTGTGTAGGAGGGCAATATTGCCACTTCAGGACTAA
Protein sequenceShow/hide protein sequence
MYCVYDDGHFDDERYHQILEIRRRFIHCLMFEFPSQIIHQTAPFPLGNNNVVFPLPFYLLYDHESISFPIYIAQLLSSCNIDSDVSEIIAGEIALLVNEATDKNPNESFH
IVAVVDYVKYTWMEPLSIPTQQPTSNMVRMEKLEEIGEDLGDCCICLERFCCNEEKVVKIPSGHVYHESCILKWLDNSHFCPLCRRAILPLQD