; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007140 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007140
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationChr10:1702598..1708352
RNA-Seq ExpressionHG10007140
SyntenyHG10007140
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023966.1 Trafficking protein particle complex subunit 6B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-8698.17Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVD PQ ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

XP_004135644.1 trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus]3.4e-8898.16Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

XP_008450727.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis melo]6.4e-8796.41Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        DNRFRWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

XP_008450728.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo]1.2e-8898.77Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]2.3e-89100Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

TrEMBL top hitse value%identityAlignment
A0A0A0M1M8 Uncharacterized protein1.6e-8898.16Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X25.6e-8998.77Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

A0A1S3BQW9 trafficking protein particle complex subunit 6B isoform X13.1e-8796.41Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        DNRFRWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X25.6e-8998.77Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

A0A6J1I0Q5 trafficking protein particle complex subunit 6B5.3e-8798.17Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWLTRMSVD PQ ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
Subjt:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC

SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b1.5e-3048.06Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S   Q               +     L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACK
         CG++RGALSN+G+   V+A++S +PACK
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACK

Q32L78 Trafficking protein particle complex subunit 6B3.9e-3150.39Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACK
         CG+IRG LSNLGI   V+A++S++PACK
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACK

Q78XR0 Trafficking protein particle complex subunit 6A1.0e-2340.62Show/hide
Query:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFP
        +E +G++VG  L ER  +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M   PQ               +     L F 
Subjt:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFP

Query:  CGIIRGALSNLGIPCAVSADISNLPACK
        CG++ GAL  LG    V+A +++LPACK
Subjt:  CGIIRGALSNLGIPCAVSADISNLPACK

Q86SZ2 Trafficking protein particle complex subunit 6B3.9e-3150.39Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACK
         CG+IRG LSNLGI   V+A++S++PACK
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACK

Q9D289 Trafficking protein particle complex subunit 6B2.0e-3048.84Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E++G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACK
         CG+IRG LSNLGI   V+A++S++PACK
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACK

Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component3.4e-7883.64Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+F
Subjt:  MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQS--ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC
        RWL+R+S+DP S  E+QD S  GE+KAAQA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP C
Subjt:  RWLTRMSVDPQS--ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAGGTATCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAACTTGCCGCCCGTCGTAT
CGAGGCAATCGGCTATCAGGTTGGCCATCAGCTCTCCGAACGATATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAAGACTTCT
GGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTTTTGCAAGATAATCGATTCCGCTGGCTTACACGTATGTCAGTGGATCCT
CAAAGTGAATCACAGGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGTGGAATCATAAGGGGTGCTCTCTCAAATTT
GGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGAGGTATCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAACTTGCCGCCCGTCGTAT
CGAGGCAATCGGCTATCAGGTTGGCCATCAGCTCTCCGAACGATATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAAGACTTCT
GGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTTTTGCAAGATAATCGATTCCGCTGGCTTACACGTATGTCAGTGGATCCT
CAAAGTGAATCACAGGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGTGGAATCATAAGGGGTGCTCTCTCAAATTT
GGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTAAGTAA
Protein sequenceShow/hide protein sequence
MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDP
QSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACK