; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007142 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007142
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationChr10:1724757..1730047
RNA-Seq ExpressionHG10007142
SyntenyHG10007142
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR013783 - Immunoglobulin-like fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023964.1 Vesicle-associated protein 2-2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-0832.89Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------FGKNSSKNIEERKL
        + +KQ SC+IQL NNT DHVAFK                                                               FGK+ SKNIEE KL
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------FGKNSSKNIEERKL

Query:  ATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
         TI+V P+  P  + + + V +QS+D+Q+EELKLKI +L  KLHE  ++
Subjt:  ATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

XP_008450732.1 PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]1.6e-1241.77Show/hide
Query:  VEVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSK
        +EV+KQSSCSIQLTNN L +VAFK                                                                     F KN +K
Subjt:  VEVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSK

Query:  -NIEERKLATILVRPS-NSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
         NIEERKL+TILV+ S  S TIEAL+VGVSNQS DKQIEELKLKI +L+QKLHE  +S
Subjt:  -NIEERKLATILVRPS-NSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

XP_031736025.1 vesicle-associated protein 1-3-like [Cucumis sativus]1.2e-1241.03Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSKN
        EVRKQSSCSIQLTNN L +VAFK                                                                     F KN SKN
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSKN

Query:  IEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
        IEER+L TILV+  S SPTIE L V VSNQS D +IEELKLKI EL++KLHE  +S
Subjt:  IEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

XP_031736065.1 vesicle-associated protein 2-1-like [Cucumis sativus]1.9e-1341.77Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK----------------------------------------------------------------------FGKNSSK
        EV+KQSSCSIQL NN LD+VAFK                                                                      F KN SK
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK----------------------------------------------------------------------FGKNSSK

Query:  -NIEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
         NIEER+L+TILV+  S+SPTIE LNVGVSNQS DK+IEELKLKI +L+QKLHE  +S
Subjt:  -NIEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]4.1e-1645.33Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE
        EVRKQSSC IQLTNNTLD+VAFK                                                                   FGK++SKNIE
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE

Query:  ERKLATILVRPSNSPTIEALNVGVSNQ-SDDKQIEELKLKINELNQKLHE
        ER L TILV PS+S T+EAL+VGVSN+ S DKQIEELKLKINEL+QKLHE
Subjt:  ERKLATILVRPSNSPTIEALNVGVSNQ-SDDKQIEELKLKINELNQKLHE

TrEMBL top hitse value%identityAlignment
A0A0A0LWK4 Uncharacterized protein2.7e-1375.38Show/hide
Query:  FGKNSSK-NIEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
        F KN SK NIEER+L+TILV+  S+SPTIE LNVGVSNQS DK+IEELKLKI +L+QKLHEV LS
Subjt:  FGKNSSK-NIEERKLATILVR-PSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

A0A1S3BPU6 vesicle-associated protein 1-3-like7.8e-1341.77Show/hide
Query:  VEVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSK
        +EV+KQSSCSIQLTNN L +VAFK                                                                     F KN +K
Subjt:  VEVRKQSSCSIQLTNNTLDHVAFK---------------------------------------------------------------------FGKNSSK

Query:  -NIEERKLATILVRPS-NSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
         NIEERKL+TILV+ S  S TIEAL+VGVSNQS DKQIEELKLKI +L+QKLHE  +S
Subjt:  -NIEERKLATILVRPS-NSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

A0A6J1DM49 vesicle-associated protein 2-2-like6.0e-0533.76Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE
        E++KQSSCSIQLTNN  DHVAFK                                                                   FG++  K IE
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE

Query:  ERKLATILVRPSN-SPTIEALN-----VGVSNQSD--DKQIEELKLKINELNQKLHE
        ++KL   LVR SN SP  EALN     +GVS+     DK +E+LKL I EL  KLHE
Subjt:  ERKLATILVRPSN-SPTIEALN-----VGVSNQSD--DKQIEELKLKINELNQKLHE

A0A6J1HCB9 vesicle-associated protein 2-2-like9.8e-0832.03Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE
        + +KQ SC+IQL NNT DHVAFK                                                                   FGK+ SKNIE
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE

Query:  ERKLATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
        E KL TI+V P+  P  + + + V +QS+D+Q+EELKLKI +L  KLHE  ++
Subjt:  ERKLATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

A0A6J1HZ48 vesicle-associated protein 2-2-like1.3e-0732.03Show/hide
Query:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE
        + +KQ SC IQL NNT DHVAFK                                                                   FGK+ SKNIE
Subjt:  EVRKQSSCSIQLTNNTLDHVAFK-------------------------------------------------------------------FGKNSSKNIE

Query:  ERKLATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS
        E KL TI+V P+  P  + + + V +QS+D+Q+EELKLKI +L  KLHE  ++
Subjt:  ERKLATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAAGTACGGAAACAAAGCTCATGCTCAATTCAACTAACAAATAATACACTCGACCATGTTGCTTTTAAGTTTGGAAAAAATAGTAGCAAGAACATTGAAGAAAGGAA
ATTGGCTACAATCCTTGTTAGGCCATCTAATTCCCCAACTATTGAAGCATTGAATGTTGGAGTTTCAAACCAAAGCGATGATAAGCAAATAGAGGAATTGAAGTTAAAGA
TCAATGAACTTAATCAAAAACTCCATGAGGTTTGTCTTTCATAA
mRNA sequenceShow/hide mRNA sequence
GTTGAAGTACGGAAACAAAGCTCATGCTCAATTCAACTAACAAATAATACACTCGACCATGTTGCTTTTAAGTTTGGAAAAAATAGTAGCAAGAACATTGAAGAAAGGAA
ATTGGCTACAATCCTTGTTAGGCCATCTAATTCCCCAACTATTGAAGCATTGAATGTTGGAGTTTCAAACCAAAGCGATGATAAGCAAATAGAGGAATTGAAGTTAAAGA
TCAATGAACTTAATCAAAAACTCCATGAGGTTTGTCTTTCATAA
Protein sequenceShow/hide protein sequence
VEVRKQSSCSIQLTNNTLDHVAFKFGKNSSKNIEERKLATILVRPSNSPTIEALNVGVSNQSDDKQIEELKLKINELNQKLHEVCLS