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HG10007143 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007143
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationChr10:1737031..1737452
RNA-Seq ExpressionHG10007143
SyntenyHG10007143
Gene Ontology termsGO:0061817 - endoplasmic reticulum-plasma membrane tethering (biological process)
GO:0090158 - endoplasmic reticulum membrane organization (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008962 - PapD-like superfamily
IPR013783 - Immunoglobulin-like fold
IPR016763 - Vesicle-associated membrane-protein-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450732.1 PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]8.1e-2570.64Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH
        MQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KLH
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH

Query:  EVCLSINIL
        E  +SI+ L
Subjt:  EVCLSINIL

XP_023545322.1 vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo]1.4e-2459.05Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCL
        MQAQ +AP DM+CKDKFLIQST+VPIETT++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHE  +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCL

Query:  SINIL
        +I+ L
Subjt:  SINIL

XP_031736025.1 vesicle-associated protein 1-3-like [Cucumis sativus]1.4e-2467.59Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHE
        MQAQK+APPDM CKDKFLIQSTIVP E  L ED+ S   LF +N SKNIEE++L  ILV+  S+SPTIE LRV VS QS D +IEELKLKIT+LD KLHE
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQNNSKNIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHE

Query:  VCLSINIL
          +SI+ L
Subjt:  VCLSINIL

XP_031736065.1 vesicle-associated protein 2-1-like [Cucumis sativus]2.1e-2569.09Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL
        MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ ILV+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KL
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL

Query:  HEVCLSINIL
        HE  +SI+ L
Subjt:  HEVCLSINIL

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]3.2e-2972.64Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHEVC
        MQAQK+APPDM CKDKFLIQSTIVPIETT EDI S  LFG++NSKNIEE+ L  ILV PSSS T+EAL VGVS + S+DKQIEELKLKI +LD KLHE  
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVS-EQSNDKQIEELKLKITQLDLKLHEVC

Query:  LSINIL
        ++I+ L
Subjt:  LSINIL

TrEMBL top hitse value%identityAlignment
A0A0A0LWK4 Uncharacterized protein7.2e-2771.3Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL
        MQAQ++APPDM CKDKFLIQSTIVPIET L ED +++   LF +N SK NIEE++L+ ILV+  SSSPTIE L VGVS QS DK+IEELKLKITQLD KL
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN--GLFGQNNSK-NIEEKKLAIILVR-PSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKL

Query:  HEVCLSIN
        HEV LS N
Subjt:  HEVCLSIN

A0A1S3BPU6 vesicle-associated protein 1-3-like3.9e-2570.64Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH
        MQAQK+APPDM CKDKFLIQSTIVPIE  L ED+ S   LF +N N  NIEE+KL+ ILV+ S +S TIEAL VGVS QS DKQIEELKLKITQLD KLH
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTL-EDIISN-GLFGQN-NSKNIEEKKLAIILVRPS-SSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLH

Query:  EVCLSINIL
        E  +SI+ L
Subjt:  EVCLSINIL

A0A6J1DM49 vesicle-associated protein 2-2-like3.8e-2060Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSS-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQLD
        MQ Q +APPDMICKDKFLI STIVP ETT+EDI S+ LFG++  K IE+KKL   LVR S+ SP  EAL      +GVS+  +  DK +E+LKL IT+L+
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSS-SPTIEALR-----VGVSEQSN--DKQIEELKLKITQLD

Query:  LKLHE
        LKLHE
Subjt:  LKLHE

A0A6J1HCB9 vesicle-associated protein 2-2-like3.3e-2458.1Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCL
        MQAQ +AP DM+CKDKFLIQST+VP ETT++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHE  +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCL

Query:  SINIL
        +I+ L
Subjt:  SINIL

A0A6J1HZ48 vesicle-associated protein 2-2-like5.7e-2457.69Show/hide
Query:  QAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLS
        QAQ +AP DM+CKDKFLIQST+VPIET ++DI S  +FG++ SKNIEE KL  I+V P+  P  + + + V +QSND+Q+EELKLKIT+L++KLHE  ++
Subjt:  QAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLS

Query:  INIL
        I+ L
Subjt:  INIL

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-26.3e-1255.88Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

Q84WW5 Vesicle-associated protein 1-31.5e-0540.62Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPT
        MQAQK AP DM CKDKFL+Q+ +V   TT +++++  +F +   + IE+ KL ++ + P++ P+
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPT

Q8VZ95 Vesicle-associated protein 1-14.4e-0540.62Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPT
        MQAQK AP DM CKDKFL+Q  I     T +++    +F +     +EE KL +  V P   P+
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPT

Q9LVU1 Vesicle-associated protein 2-16.1e-0743.55Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS

Q9SHC8 Vesicle-associated protein 1-28.8e-0636.71Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDK
        MQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V P   P+   +R G  E S+ +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDK

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-24.5e-1355.88Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

AT1G08820.2 vamp/synaptobrevin-associated protein 27-24.5e-1355.88Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL
        MQA K  PPDM+CKDKFLIQST V  ETT EDI ++ +F +   K+IEE KL + LV PS SP +  +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEAL

AT2G45140.1 plant VAP homolog 126.3e-0736.71Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDK
        MQAQK AP D+ CKDKFL+Q  +     T +D +++ +F +     +EE KL ++ V P   P+   +R G  E S+ +
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDK

AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein4.3e-0843.55Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS

AT5G47180.2 Plant VAMP (vesicle-associated membrane protein) family protein4.3e-0843.55Show/hide
Query:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS
        +QAQ+  PPDM CKDKFL+QSTIVP  T +++ +    F +++ K + E KL +  + PS++
Subjt:  MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGG
TTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAG
AACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATT
GTAAACTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCACAAAAAATAGCTCCACCTGATATGATATGCAAAGACAAGTTCTTAATCCAAAGTACAATAGTTCCCATTGAGACAACTCTTGAGGATATAATTTCCAATGG
TTTGTTTGGGCAAAATAATAGCAAGAACATAGAAGAAAAGAAATTGGCTATAATTCTTGTTAGGCCATCAAGTTCCCCAACTATTGAAGCATTGAGAGTTGGAGTTTCAG
AACAAAGTAATGATAAACAAATAGAGGAATTGAAGTTAAAGATTACACAACTTGATCTAAAGCTCCATGAGGTTTGTCTCTCCATAAATATTTTGCTTTTCATATATATT
GTAAACTCTTGA
Protein sequenceShow/hide protein sequence
MQAQKIAPPDMICKDKFLIQSTIVPIETTLEDIISNGLFGQNNSKNIEEKKLAIILVRPSSSPTIEALRVGVSEQSNDKQIEELKLKITQLDLKLHEVCLSINILLFIYI
VNS