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HG10007159 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007159
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA cytidine acetyltransferase
Genome locationChr10:1889519..1892538
RNA-Seq ExpressionHG10007159
SyntenyHG10007159
Gene Ontology termsGO:0034470 - ncRNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THG07144.1 hypothetical protein TEA_019244 [Camellia sinensis var. sinensis]4.0e-0726.96Show/hide
Query:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE
        M     EE+P+ +   + QL      ++ Y+GV    S +  +L+E+  F  LFVG ++       +TC MI  L +Y+   A          +++ F  
Subjt:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE

Query:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI
         FI ++ Y   D   +  +                           RI AF+    P IELV HL+      YFGG LP  +  D+E VL L+GL  + +
Subjt:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI

Query:  QDVK
        + VK
Subjt:  QDVK

TYK28170.1 hypothetical protein E5676_scaffold289G00850 [Cucumis melo var. makuwa]1.1e-2855.33Show/hide
Query:  LFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQ--TFRERFIRSMVYFKDDLEISFTL------------------------------RIAAFVND
        LF   L   + +G +   +   L E D E    L+Y    FRERF+ SMVYFKDDLEI FTL                              RIAAFVND
Subjt:  LFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQ--TFRERFIRSMVYFKDDLEISFTL------------------------------RIAAFVND

Query:  RKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK
        RKP+IELVNHLLREFGMLYFGGRLPF M+EDEEK+LILMGLLSFSIQDVK
Subjt:  RKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK

XP_021686512.1 RNA cytidine acetyltransferase 2-like [Hevea brasiliensis]5.8e-0626.59Show/hide
Query:  KIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQ----GDFMDGPVTCCMIRGLKEYDTENAAR-------LIYQTFRERFIRSMVYFKDDLEISFTLRIA
        K+ Y+GVY   +++  + +E   F+  FVG+L      D  D    C M + L++Y+ E +          + + FR  F+R++     +L+  FTLRI 
Subjt:  KIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQ----GDFMDGPVTCCMIRGLKEYDTENAAR-------LIYQTFRERFIRSMVYFKDDLEISFTLRIA

Query:  AFVN------------------DRK--------PDI----ELVNHLLREFGMLYFGGRLPFDMDEDEEKVLIL
          ++                  D K        P+I    EL+ HL+++    YF G+LP ++ +DEE VL++
Subjt:  AFVN------------------DRK--------PDI----ELVNHLLREFGMLYFGGRLPFDMDEDEEKVLIL

XP_028085295.1 uncharacterized protein LOC114286341 isoform X1 [Camellia sinensis]4.0e-0726.96Show/hide
Query:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE
        M     EE+P+ +   + QL      ++ Y+GV    S +  +L+E+  F  LFVG ++       +TC MI  L +Y+   A          +++ F  
Subjt:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE

Query:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI
         FI ++ Y   D   +  +                           RI AF+    P IELV HL+      YFGG LP  +  D+E VL L+GL  + +
Subjt:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI

Query:  QDVK
        + VK
Subjt:  QDVK

XP_028085296.1 uncharacterized protein LOC114286341 isoform X2 [Camellia sinensis]4.0e-0726.96Show/hide
Query:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE
        M     EE+P+ +   + QL      ++ Y+GV    S +  +L+E+  F  LFVG ++       +TC MI  L +Y+   A          +++ F  
Subjt:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE

Query:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI
         FI ++ Y   D   +  +                           RI AF+    P IELV HL+      YFGG LP  +  D+E VL L+GL  + +
Subjt:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI

Query:  QDVK
        + VK
Subjt:  QDVK

TrEMBL top hitse value%identityAlignment
A0A4P1RUC4 RNA cytidine acetyltransferase1.8e-0527.93Show/hide
Query:  PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLK----EYDTENAARL---IYQTFRERFIRSMVY
        P  D+  L+  L    PEK+ YLGV  G +LD F  +    F   ++G++  + + G  TC +++ L     E D  N        YQ FR+RF R +  
Subjt:  PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLK----EYDTENAARL---IYQTFRERFIRSMVY

Query:  FKDDLEISFTL----------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK
            +E    L          R+ A+VN+   D  L+  L+     LYF  +LP  +   +  VL+ +GL + +I  ++
Subjt:  FKDDLEISFTL----------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK

A0A4S4DVT3 Uncharacterized protein1.9e-0726.96Show/hide
Query:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE
        M     EE+P+ +   + QL      ++ Y+GV    S +  +L+E+  F  LFVG ++       +TC MI  L +Y+   A          +++ F  
Subjt:  MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARL-------IYQTFRE

Query:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI
         FI ++ Y   D   +  +                           RI AF+    P IELV HL+      YFGG LP  +  D+E VL L+GL  + +
Subjt:  RFIRSMVYFKDDLEISFTL---------------------------RIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSI

Query:  QDVK
        + VK
Subjt:  QDVK

A0A5D3DY49 tRNA_bind_2 domain-containing protein5.2e-2955.33Show/hide
Query:  LFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQ--TFRERFIRSMVYFKDDLEISFTL------------------------------RIAAFVND
        LF   L   + +G +   +   L E D E    L+Y    FRERF+ SMVYFKDDLEI FTL                              RIAAFVND
Subjt:  LFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQ--TFRERFIRSMVYFKDDLEISFTL------------------------------RIAAFVND

Query:  RKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK
        RKP+IELVNHLLREFGMLYFGGRLPF M+EDEEK+LILMGLLSFSIQDVK
Subjt:  RKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK

A0A6P5U3W4 RNA cytidine acetyltransferase2.4e-0525.13Show/hide
Query:  PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NAARLIYQTFRERFIRSMVY-FKD--
        P  D+  L+  L    PEK+ Y+GV  G +LD F  +    F+  ++G +    + G  TC +++ LK  + E N  R  YQ FR RF+R + Y F+   
Subjt:  PELDI-ELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTE-NAARLIYQTFRERFIRSMVY-FKD--

Query:  --------DLEISFT-------------------------LRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK
                D +I+FT                          R+ A+ ++   D  ++  L+     LYF  +LP  +   +  +L+ +GL +  I  ++
Subjt:  --------DLEISFT-------------------------LRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK

T2M5R0 N-acetyltransferase 10 (Fragment)4.8e-0626.34Show/hide
Query:  LVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQTFRERFIRSMVYF-------------
        L+ +L     EK+DYLGV  G + D    ++N  F+ +++ +   D + G  +C M+R L+E    +   L +Q FR RFI S++ F             
Subjt:  LVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQTFRERFIRSMVYF-------------

Query:  --------------KDDLEISFT----LRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK
                      KD+L  SFT     R+  +  +   D  L+  L+ E   LYF  ++ F +   ++ +L+ +GL   SI+ ++
Subjt:  --------------KDDLEISFT----LRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGAGGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAA
CTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATTACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAG
GACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGATTTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTC
ACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGTTGGTGAACCACCTCTTAAGGGAGTTTGGAATGTTATATTTTGGGGGAAGGTTGCCATTTGA
CATGGATGAGGATGAGGAGAAAGTACTCATCCTAATGGGTCTCCTATCATTTTCAATACAAGATGTTAAGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGATCAAGACACAGAAGAGCTTCCAGAATTGGATATTGAGTTGGTTTATCAACTGGGAGGGACAGACCCGGAAAAAATTGATTATTTGGGAGTGTACTGTGGAAA
CTCACTTGATTGGTTCAATTTGTATGAAAATCTCAATTTTATCCAATTATTTGTTGGAAGATTACAGGGAGATTTTATGGATGGTCCGGTGACTTGTTGTATGATACGAG
GACTTAAAGAATATGATACAGAAAATGCTGCTCGTCTTATTTATCAAACATTTCGTGAAAGATTTATTCGCTCCATGGTTTACTTCAAAGATGATTTGGAGATTTCTTTC
ACTCTAAGAATTGCAGCTTTTGTGAATGATAGGAAGCCTGATATTGAGTTGGTGAACCACCTCTTAAGGGAGTTTGGAATGTTATATTTTGGGGGAAGGTTGCCATTTGA
CATGGATGAGGATGAGGAGAAAGTACTCATCCTAATGGGTCTCCTATCATTTTCAATACAAGATGTTAAGGTATAA
Protein sequenceShow/hide protein sequence
MRDQDTEELPELDIELVYQLGGTDPEKIDYLGVYCGNSLDWFNLYENLNFIQLFVGRLQGDFMDGPVTCCMIRGLKEYDTENAARLIYQTFRERFIRSMVYFKDDLEISF
TLRIAAFVNDRKPDIELVNHLLREFGMLYFGGRLPFDMDEDEEKVLILMGLLSFSIQDVKV