CuGenDBv2

Gene ID	HG10007161
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein translocase subunit SecA
Genome location	Chr10:1923430..1927046
RNA-Seq Expression	HG10007161
Synteny	HG10007161
Gene Ontology terms	NA
InterPro domains	IPR004027 - SEC-C motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK10174.1 protein translocase subunit SecA [Cucumis melo var. makuwa]

5.9e-113

90.6

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI  SKK+T  PNLFFP SSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+ +EGT+ISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRPQFIAKNK
        RSNLAKSGQISRNALCPCGSKKRYKRP F+ KN+
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRPQFIAKNK

XP_004135658.1 uncharacterized protein LOC101217561 [Cucumis sativus]

3.6e-110

91.59

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI FSK++T  PNLFFPFSSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+++EGT+ISSESFTLLRFADELKNARRVGA KQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_008450751.1 PREDICTED: protein translocase subunit SecA [Cucumis melo]

8.0e-110

92.04

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI  SKK+T  PNLFFP SSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+ +EGT+ISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_023530731.1 uncharacterized protein LOC111793188 [Cucurbita pepo subsp. pepo]

5.0e-104

89.38

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSR LI  S+ +T   NLFFPFSSSD SPRNC  T LQSRSIFSTTQLH SWMDKIKG   GKKS+SEGTEISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIADVEN LAKF+WAKEAQKKIEKLKEEGKP+P SIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_038878551.1 protein translocase subunit SecA 1 [Benincasa hispida]

5.2e-109

92.92

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI FSKKST  PNLFFPFSSSDHSPRNC LT LQSRSIFSTTQL+GSWMDKIKGVI GKKS S+GT+ISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIADVENVLAKFMWAK+AQ KIEKLK EGKPLPTSIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQ+SRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWL6 Uncharacterized protein

1.7e-110

91.59

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI FSK++T  PNLFFPFSSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+++EGT+ISSESFTLLRFADELKNARRVGA KQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A1S3BPC0 protein translocase subunit SecA

3.9e-110

92.04

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI  SKK+T  PNLFFP SSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+ +EGT+ISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A5D3CG47 Protein translocase subunit SecA

2.9e-113

90.6

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSRALI  SKK+T  PNLFFP SSSDH+P NCYLT LQSRSIFSTTQLHGSWMDKIKGVI GKK+ +EGT+ISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRPQFIAKNK
        RSNLAKSGQISRNALCPCGSKKRYKRP F+ KN+
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRPQFIAKNK

A0A6J1EXB8 uncharacterized protein LOC111439055

2.1e-103

88.5

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSR LI  S+ +T   NLFFPFSSSD SPRNC  T LQSRSIFSTTQL+ SWMDKIKG   GKKS SEGTEISSESFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIADVEN LAKF+WAKEAQKKIEKLKEEGKP+P S+AEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A6J1HQG1 uncharacterized protein LOC111465670

2.4e-99

86.73

Show/hide

Query:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ
        MRSSSR LI  S+ +T   NL FPFSS D SPRNC    LQSRSIFSTTQL+ SWMDKIKG   GKKS SEGTEISSESFTLLRFA+ELKNARRVGAFKQ
Subjt:  MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIADVEN LAKF+WAKEAQKKIEKLKEEGKP+P S+AEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G04950.1 CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

1.6e-71

72.19

Show/hide

Query:  QSRSIFSTTQLHGSWMDKIKGVI-GGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQ
        Q RSI ST  L+G WMD IKGV  G K +  E + +  E+FTLLRFADELKNARR+G FKQYIVGRSSEATFADAFEKQEA+IRYLG  D+TGEN+Q SQ
Subjt:  QSRSIFSTTQLHGSWMDKIKGVI-GGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQ

Query:  KQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
        KQ+AAK+C CTI DVEN L+KF WA++A KK+ +LKE GKPLP ++ E+QK++GS P+DLARSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  KQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTCTTCCTCTCGAGCATTGATCATTTTTTCCAAGAAAAGCACTCGGAAGCCAAATTTGTTCTTTCCCTTTTCTTCTTCCGATCACAGTCCTCGTAACTGTTATTT
GACTCCCTTACAGTCCCGATCCATCTTTTCCACGACTCAGCTTCATGGTTCATGGATGGACAAGATCAAGGGAGTCATCGGTGGGAAGAAAAGCGCTTCTGAAGGAACCG
AGATCAGCTCCGAGTCCTTTACTCTCCTCCGGTTTGCTGATGAGTTGAAAAATGCCCGAAGAGTGGGAGCATTTAAGCAATATATAGTAGGACGAAGTAGTGAAGCAACT
TTTGCAGATGCTTTTGAGAAGCAGGAAGCAATTATTCGTTATTTGGGAGGTTTTGATTCCACTGGAGAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAATTG
TAACTGCACGATCGCTGATGTTGAGAATGTGCTGGCGAAATTTATGTGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTGCCGACAA
GCATTGCCGAGGTCCAGAAACTGGTGGGTTCAAATCCATTGGATCTTGCTAGGTCAAATTTGGCCAAGAGTGGCCAGATAAGCCGGAATGCTCTCTGTCCTTGCGGTTCA
AAGAAGAGATATAAACGTCCTCAATTCATAGCTAAAAACAAATCAAAACCAGAGAATCTGTTGGCGAGCAATTTGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRSSSRALIIFSKKSTRKPNLFFPFSSSDHSPRNCYLTPLQSRSIFSTTQLHGSWMDKIKGVIGGKKSASEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEAT
FADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIADVENVLAKFMWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGS
KKRYKRPQFIAKNKSKPENLLASNL

HG10007161 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome