; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007239 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007239
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBeta-galactosidase
Genome locationChr10:2876272..2880712
RNA-Seq ExpressionHG10007239
SyntenyHG10007239
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653429.1 hypothetical protein Csa_007049 [Cucumis sativus]9.1e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

KAE8653440.1 hypothetical protein Csa_007067 [Cucumis sativus]9.1e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

TYK10088.1 beta-galactosidase-like [Cucumis melo var. makuwa]9.1e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

XP_016900957.1 PREDICTED: beta-galactosidase-like, partial [Cucumis melo]9.1e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

XP_038879935.1 beta-galactosidase-like isoform X2 [Benincasa hispida]9.1e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

TrEMBL top hitse value%identityAlignment
A0A0A0LWG9 Beta-galactosidase6.4e-1091.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQN GSLVNYY+
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

A0A1S3BQW2 Beta-galactosidase1.4e-0991.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG+PTPYRP EDVAFSVARFIQN GSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

A0A1S4DYA0 Beta-galactosidase4.4e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

A0A5D3CDZ9 Beta-galactosidase1.4e-0991.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG+PTPYRP EDVAFSVARFIQN GSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

A0A5D3CFT3 Beta-galactosidase4.4e-1197.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YTAFG PTPYRPPEDVAFSVARFIQNGGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

SwissProt top hitse value%identityAlignment
P48980 Beta-galactosidase4.0e-0971.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG P PYRP ED+AF+VARFIQ GGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

Q00662 Putative beta-galactosidase2.1e-1080Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YT +G P PYRP EDVAFSVARFIQNGGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

Q9SCV0 Beta-galactosidase 128.9e-0971.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG   PYRP ED+A SVARFIQNGGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

Q9SCV8 Beta-galactosidase 43.1e-0977.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YT FG   PYRP ED+A+SVARFIQ GGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

Q9SCW1 Beta-galactosidase 11.8e-0974.29Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG P PYRP ED+AFSVARFIQ GGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

Arabidopsis top hitse value%identityAlignment
AT3G13750.1 beta galactosidase 11.3e-1074.29Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG P PYRP ED+AFSVARFIQ GGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

AT3G52840.1 beta-galactosidase 24.1e-0971.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG   P RP ED+AFSVARFIQNGGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

AT4G26140.1 beta-galactosidase 126.3e-1071.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG   PYRP ED+A SVARFIQNGGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

AT4G26140.2 beta-galactosidase 126.3e-1071.43Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        +T FG   PYRP ED+A SVARFIQNGGS +NYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM

AT5G56870.1 beta-galactosidase 42.2e-1077.14Show/hide
Query:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM
        YT FG   PYRP ED+A+SVARFIQ GGSLVNYYM
Subjt:  YTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGCCAGATGTCATGTACACTGCATTTGGTAGTCCAACTCCTTACAGGCCACCTGAAGACGTGGCCTTTTCAGTTGCAAGATTCATACAGAATGGTGGTTCTCT
CGTCAATTATTATATGGTAATGAGCTATGAGTGTGCAGTAAAGGTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGCCAGATGTCATGTACACTGCATTTGGTAGTCCAACTCCTTACAGGCCACCTGAAGACGTGGCCTTTTCAGTTGCAAGATTCATACAGAATGGTGGTTCTCT
CGTCAATTATTATATGGTAATGAGCTATGAGTGTGCAGTAAAGGTTGGCTGA
Protein sequenceShow/hide protein sequence
MAEPDVMYTAFGSPTPYRPPEDVAFSVARFIQNGGSLVNYYMVMSYECAVKVG