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HG10007282 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007282
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBinding isoform 1
Genome locationChr10:3325704..3325916
RNA-Seq ExpressionHG10007282
SyntenyHG10007282
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055788.1 Tetratricopeptide TPR-1 [Cucumis melo var. makuwa]6.6e-2590Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAV STLYNYNA YLDF    L+IL
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
OMO67205.1 Tetratricopeptide TPR-1 [Corchorus capsularis]3.3e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
PPR86876.1 hypothetical protein GOBAR_AA33811 [Gossypium barbadense]3.3e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
TYK10039.1 Binding isoform 4 [Cucumis melo var. makuwa]6.6e-2590Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAV STLYNYNA YLDF    L+IL
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
VFQ76370.1 unnamed protein product [Cuscuta campestris]3.3e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
TrEMBL top hitse value%identityAlignment
A0A067ERJ5 Uncharacterized protein (Fragment)1.6e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
A0A2H5QV77 TPR_REGION domain-containing protein1.6e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
A0A5A7UL36 Tetratricopeptide TPR-13.2e-2590Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAV STLYNYNA YLDF    L+IL
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
A0A5D3CIG7 Binding isoform 43.2e-2590Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAV STLYNYNA YLDF    L+IL
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL
A0A6A2Z7Z1 Protein CTR9-like protein1.6e-16100Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
SwissProt top hitse value%identityAlignment
B5X0I6 Protein CTR9 homolog1.8e-1795.74Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
Arabidopsis top hitse value%identityAlignment
AT2G06210.1 binding1.3e-1895.74Show/hide
Query:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA
        MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIA
Subjt:  MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTGTGTACATACCAGTACAGAACTCGGAGGAGGAGGTCAGGGTAGCTCTCGATCAACTCCCCAGGGACGCTTCCGACATTCTCGACATACTTAAGGCCGAGCA
AGCTCCGTTAGATCTCTGGCTAATCATCGCGGTTTGTTCTACTCTCTATAACTATAATGCTATGTACCTCGATTTCGGCCCCCCTCCTTTACTCATCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTGTGTACATACCAGTACAGAACTCGGAGGAGGAGGTCAGGGTAGCTCTCGATCAACTCCCCAGGGACGCTTCCGACATTCTCGACATACTTAAGGCCGAGCA
AGCTCCGTTAGATCTCTGGCTAATCATCGCGGTTTGTTCTACTCTCTATAACTATAATGCTATGTACCTCGATTTCGGCCCCCCTCCTTTACTCATCTTGTGA
Protein sequenceShow/hide protein sequence
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAVCSTLYNYNAMYLDFGPPPLLIL