; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007308 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007308
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr10:3537269..3544770
RNA-Seq ExpressionHG10007308
SyntenyHG10007308
Gene Ontology termsGO:0006744 - ubiquinone biosynthetic process (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR012762 - Ubiquinone biosynthesis protein COQ9
IPR013718 - COQ9
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588096.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-14090.6Show/hide
Query:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLPIRES H  H    FPGKF  Y LRR  + L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLI NFSWYDAG+REYF DPTTLLVAQL LMGWVEGRRWADMVNPGSVDVDLKLPHKKK  PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS  +S
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

TYK10011.1 photosystem I chlorophyll a/b-binding protein 6 [Cucumis melo var. makuwa]9.9e-14593.51Show/hide
Query:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE
        MALSISSTALS+ PIRES HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAE
Subjt:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE

Query:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW
        LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMMW
Subjt:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW

Query:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS   S
Subjt:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

XP_004144043.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis sativus]4.9e-14492.8Show/hide
Query:  MALSISS--TALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ
        MALSISS  TALS+ PIR+S+HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQ
Subjt:  MALSISS--TALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKKAK DVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS  +S
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

XP_008450947.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis melo]9.9e-14593.51Show/hide
Query:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE
        MALSISSTALS+ PIRES HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAE
Subjt:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE

Query:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW
        LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMMW
Subjt:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW

Query:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS   S
Subjt:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

XP_022929243.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata]3.0e-14190.98Show/hide
Query:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLPIRES H  H    FPGKF  Y LRR  + L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYF DPTTLLVAQL LMGWVEGRRWADMVNPGSVDVDLKLPHKKK  PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS  +S
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

TrEMBL top hitse value%identityAlignment
A0A0A0LX05 Chlorophyll a-b binding protein, chloroplastic2.4e-14492.8Show/hide
Query:  MALSISS--TALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ
        MALSISS  TALS+ PIR+S+HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQ
Subjt:  MALSISS--TALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKKAK DVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS  +S
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

A0A1S3BQD6 Chlorophyll a-b binding protein, chloroplastic4.8e-14593.51Show/hide
Query:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE
        MALSISSTALS+ PIRES HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAE
Subjt:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE

Query:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW
        LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMMW
Subjt:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW

Query:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS   S
Subjt:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

A0A5A7UKU4 Chlorophyll a-b binding protein, chloroplastic4.8e-14593.51Show/hide
Query:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE
        MALSISSTALS+ PIRES HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAE
Subjt:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE

Query:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW
        LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMMW
Subjt:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW

Query:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS   S
Subjt:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

A0A5D3CDV1 Chlorophyll a-b binding protein, chloroplastic4.8e-14593.51Show/hide
Query:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE
        MALSISSTALS+ PIRES HR +FPG F N+KLRRD SDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAE
Subjt:  MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAE

Query:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW
        LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF DPTTLLVAQLALMGWVEGRRWAD+VNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMMW
Subjt:  LMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMW

Query:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS   S
Subjt:  GRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

A0A6J1ERI7 Chlorophyll a-b binding protein, chloroplastic1.4e-14190.98Show/hide
Query:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLPIRES H  H    FPGKF  Y LRR  + L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPIRESFHRGH----FPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYF DPTTLLVAQL LMGWVEGRRWADMVNPGSVDVDLKLPHKKK  PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS  +S
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.0e-8363.98Show/hide
Query:  SSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLL
        ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L+W  QAEL+H RWAML  AGI +PE    +G++   SWY AG +EYFTD TTL 
Subjt:  SSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLL

Query:  VAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH
        + +L L+GW EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH
Subjt:  VAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH

Query:  VADPGHCNIFS
        +ADPGH  IF+
Subjt:  VADPGHCNIFS

P13869 Chlorophyll a-b binding protein, chloroplastic2.4e-8567.98Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG
        PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI +PE+   +G++   SWY AG +EYFTD TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG

Query:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFS
        IF+
Subjt:  IFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.2e-5247.19Show/hide
Query:  SNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN
        S+ +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I  
Subjt:  SNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN

Query:  FSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVG
          WYDAG  +YF   +TL V +  L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G
Subjt:  FSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVG

Query:  LWFQAIYTGQGPLENLAAHVADPGHCNIFST
           Q   TG+GP ENL  H++DP H  I  T
Subjt:  LWFQAIYTGQGPLENLAAHVADPGHCNIFST

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.5e-10869.52Show/hide
Query:  MALSISSTALSTLPIRES------FHRGHFPGKFS-NYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL
        MA +I+S   STL +  S        R H     S   +L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ L
Subjt:  MALSISSTALSTLPIRES------FHRGHFPGKFS-NYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL

Query:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGF
        KWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSWYDAGSREYF D TTL VAQ+ LMGW EGRRWAD++ PGSVD++ K PHK   KPDVGYPGG 
Subjt:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGF

Query:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL AH+ADPGHCN+FS   S
Subjt:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic7.7e-8466.01Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYFTD TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG

Query:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFS
        IF+
Subjt:  IFS

Arabidopsis top hitse value%identityAlignment
AT1G19140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 748 Blast hits to 748 proteins in 260 species: Archae - 0; Bacteria - 218; Metazoa - 126; Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink).1.5e-7159.23Show/hide
Query:  MYRTAAKRLIV--GVTSDRNGIHRLRFPS-PSTFLDHSSFSTATNSQVFPNSQIPNQHHIRQETPTSSDSASSSSSSWSTSTSGEETRSHENRRPRVEYQ
        MYRTAAKRL+   G+T+ R     LR P   ST +  S  S    S +  N++ P    + +++   + S  ++SSS  T   GE  R HE+R+PR E+Q
Subjt:  MYRTAAKRLIV--GVTSDRNGIHRLRFPS-PSTFLDHSSFSTATNSQVFPNSQIPNQHHIRQETPTSSDSASSSSSSWSTSTSGEETRSHENRRPRVEYQ

Query:  EEQARVLQAALSHVVKLGWTEAAMIAGARDIGMSPSIVGSFARKEAELVEFFMDDCLQRLIDLIEAEEGLKNLILRERIYKLVRARLEMQAPFMSKWAQA
        EEQARVL A+L HV +LGWTE AM+AG+RD+G+SPSIVGSF+RKEA LVEFFMD+CLQ L+D I++   L+NLI  ERI KL+R RLEMQ P+MSKW QA
Subjt:  EEQARVLQAALSHVVKLGWTEAAMIAGARDIGMSPSIVGSFARKEAELVEFFMDDCLQRLIDLIEAEEGLKNLILRERIYKLVRARLEMQAPFMSKWAQA

Query:  LSIQAQPANLATSFKQRATLVDEIWHAAGGDTSDIDWYVKRTILGGIYSATEIYMLTDSS
        LSIQA P N+ TSFKQRA LVDEIWHA G   SD+DWYVKRTILGG+YS TEIYMLTD S
Subjt:  LSIQAQPANLATSFKQRATLVDEIWHAAGGDTSDIDWYVKRTILGGIYSATEIYMLTDSS

AT1G19140.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).7.0e-7258.94Show/hide
Query:  MYRTAAKRLIV--GVTSDRNGIHRLRFPS-PSTFLDHSSFSTATNSQVFPNSQIPNQHHIRQETPTSSDSASSSSSSWSTSTSGEETRSHENRRPRVEYQ
        MYRTAAKRL+   G+T+ R     LR P   ST +  S  S    S +  N++ P    + +++   + S  ++SSS  T   GE  R HE+R+PR E+Q
Subjt:  MYRTAAKRLIV--GVTSDRNGIHRLRFPS-PSTFLDHSSFSTATNSQVFPNSQIPNQHHIRQETPTSSDSASSSSSSWSTSTSGEETRSHENRRPRVEYQ

Query:  EEQARVLQAALSHVVKLGWTEAAMIAGARDIGMSPSIVGSFARKEAELVEFFMDDCLQRLIDLIEAEEGLKNLILRERIYKLVRARLEMQAPFMSKWAQA
        EEQARVL A+L HV +LGWTE AM+AG+RD+G+SPSIVGSF+RKEA LVEFFMD+CLQ L+D I++   L+NLI  ERI KL+R RLEMQ P+MSKW QA
Subjt:  EEQARVLQAALSHVVKLGWTEAAMIAGARDIGMSPSIVGSFARKEAELVEFFMDDCLQRLIDLIEAEEGLKNLILRERIYKLVRARLEMQAPFMSKWAQA

Query:  LSIQAQPANLATSFKQRATLVDEIWHAAGGDTSDIDWYVKRTILGGIYSATEIYMLTDSSPGE
        LSIQA P N+ TSFKQRA LVDEIWHA G   SD+DWYVKRTILGG+YS TEIYMLTD S  E
Subjt:  LSIQAQPANLATSFKQRATLVDEIWHAAGGDTSDIDWYVKRTILGGIYSATEIYMLTDSSPGE

AT1G19150.1 photosystem I light harvesting complex gene 61.1e-10969.52Show/hide
Query:  MALSISSTALSTLPIRES------FHRGHFPGKFS-NYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL
        MA +I+S   STL +  S        R H     S   +L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ L
Subjt:  MALSISSTALSTLPIRES------FHRGHFPGKFS-NYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL

Query:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGF
        KWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSWYDAGSREYF D TTL VAQ+ LMGW EGRRWAD++ PGSVD++ K PHK   KPDVGYPGG 
Subjt:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGF

Query:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS
        WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL AH+ADPGHCN+FS   S
Subjt:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTAS

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A48.5e-5447.19Show/hide
Query:  SNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN
        S+ +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I  
Subjt:  SNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN

Query:  FSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVG
          WYDAG  +YF   +TL V +  L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G
Subjt:  FSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVG

Query:  LWFQAIYTGQGPLENLAAHVADPGHCNIFST
           Q   TG+GP ENL  H++DP H  I  T
Subjt:  LWFQAIYTGQGPLENLAAHVADPGHCNIFST

AT3G61470.1 photosystem I light harvesting complex gene 25.5e-8566.01Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYFTD TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMG

Query:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFS
        IF+
Subjt:  IFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCAACTTTACCAATCAGAGAATCATTTCACAGAGGACATTTTCCGGGAAAATTCTCAAATTATAAGCTCCGGCGAGACTG
CTCCGATTTGAAGGCTGCAAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCTGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCA
GCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCGCAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCC
GTGGCCGGAATCCTACTACCGGAATGGTTCGAAAGCTTAGGACTAATACAGAATTTCTCGTGGTACGACGCCGGATCGCGAGAGTATTTTACAGATCCGACGACATTGCT
GGTGGCGCAATTGGCATTGATGGGGTGGGTTGAGGGGCGGCGGTGGGCAGACATGGTCAACCCGGGCAGCGTTGACGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAA
AGCCAGACGTGGGCTACCCGGGTGGGTTTTGGTTTGACCCGATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTCATGGTGTTGCGGACTAAAGAGATAAAGAATGGGCGG
CTGGCCATGCTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTCGCCGCCCACGTGGCAGATCCCGGCCATTGCAATATATT
TTCGACCACTGCATCATTTCCAGAGCGGCAGACCGACGGAGACATGTATCGAACGGCGGCGAAGCGTCTGATCGTCGGCGTGACCTCCGATAGAAATGGCATTCACCGTC
TCAGGTTTCCATCACCTTCCACCTTCCTCGACCATTCTTCCTTCTCCACAGCTACCAATTCACAAGTATTTCCTAATTCTCAAATCCCCAATCAACACCATATTCGTCAA
GAAACTCCTACTTCTTCTGATTCTGCATCTTCTTCATCTTCTTCTTGGTCCACATCAACTTCGGGCGAAGAAACCCGAAGCCATGAGAATCGGCGGCCGAGAGTTGAGTA
TCAAGAGGAGCAGGCTCGCGTCCTCCAGGCTGCTCTTTCCCATGTGGTGAAGCTAGGATGGACTGAGGCCGCTATGATTGCTGGTGCAAGGGATATTGGCATGTCACCTT
CCATTGTTGGATCCTTTGCCAGGAAGGAAGCCGAATTAGTTGAGTTTTTCATGGATGATTGCTTACAGCGGCTCATCGATCTAATTGAGGCAGAAGAAGGCCTTAAGAAT
TTGATACTTCGTGAACGTATTTACAAGCTTGTTAGAGCTCGTCTAGAAATGCAAGCTCCCTTCATGTCAAAATGGGCTCAGGCTCTCAGTATCCAGGCACAACCAGCAAA
TCTAGCAACTAGCTTTAAACAACGGGCGACGCTCGTTGATGAGATTTGGCATGCTGCTGGCGGTGACACCTCTGACATTGATTGGTACGTCAAGCGTACTATTTTGGGAG
GAATATACTCAGCTACTGAGATATACATGCTCACTGATAGTTCTCCAGGTGAATTTTCTCAAGTTCCTGGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCAACTTTACCAATCAGAGAATCATTTCACAGAGGACATTTTCCGGGAAAATTCTCAAATTATAAGCTCCGGCGAGACTG
CTCCGATTTGAAGGCTGCAAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCTGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCA
GCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCGCAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCC
GTGGCCGGAATCCTACTACCGGAATGGTTCGAAAGCTTAGGACTAATACAGAATTTCTCGTGGTACGACGCCGGATCGCGAGAGTATTTTACAGATCCGACGACATTGCT
GGTGGCGCAATTGGCATTGATGGGGTGGGTTGAGGGGCGGCGGTGGGCAGACATGGTCAACCCGGGCAGCGTTGACGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAA
AGCCAGACGTGGGCTACCCGGGTGGGTTTTGGTTTGACCCGATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTCATGGTGTTGCGGACTAAAGAGATAAAGAATGGGCGG
CTGGCCATGCTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTCGCCGCCCACGTGGCAGATCCCGGCCATTGCAATATATT
TTCGACCACTGCATCATTTCCAGAGCGGCAGACCGACGGAGACATGTATCGAACGGCGGCGAAGCGTCTGATCGTCGGCGTGACCTCCGATAGAAATGGCATTCACCGTC
TCAGGTTTCCATCACCTTCCACCTTCCTCGACCATTCTTCCTTCTCCACAGCTACCAATTCACAAGTATTTCCTAATTCTCAAATCCCCAATCAACACCATATTCGTCAA
GAAACTCCTACTTCTTCTGATTCTGCATCTTCTTCATCTTCTTCTTGGTCCACATCAACTTCGGGCGAAGAAACCCGAAGCCATGAGAATCGGCGGCCGAGAGTTGAGTA
TCAAGAGGAGCAGGCTCGCGTCCTCCAGGCTGCTCTTTCCCATGTGGTGAAGCTAGGATGGACTGAGGCCGCTATGATTGCTGGTGCAAGGGATATTGGCATGTCACCTT
CCATTGTTGGATCCTTTGCCAGGAAGGAAGCCGAATTAGTTGAGTTTTTCATGGATGATTGCTTACAGCGGCTCATCGATCTAATTGAGGCAGAAGAAGGCCTTAAGAAT
TTGATACTTCGTGAACGTATTTACAAGCTTGTTAGAGCTCGTCTAGAAATGCAAGCTCCCTTCATGTCAAAATGGGCTCAGGCTCTCAGTATCCAGGCACAACCAGCAAA
TCTAGCAACTAGCTTTAAACAACGGGCGACGCTCGTTGATGAGATTTGGCATGCTGCTGGCGGTGACACCTCTGACATTGATTGGTACGTCAAGCGTACTATTTTGGGAG
GAATATACTCAGCTACTGAGATATACATGCTCACTGATAGTTCTCCAGGTGAATTTTCTCAAGTTCCTGGACTTTGA
Protein sequenceShow/hide protein sequence
MALSISSTALSTLPIRESFHRGHFPGKFSNYKLRRDCSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLA
VAGILLPEWFESLGLIQNFSWYDAGSREYFTDPTTLLVAQLALMGWVEGRRWADMVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGR
LAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSTTASFPERQTDGDMYRTAAKRLIVGVTSDRNGIHRLRFPSPSTFLDHSSFSTATNSQVFPNSQIPNQHHIRQ
ETPTSSDSASSSSSSWSTSTSGEETRSHENRRPRVEYQEEQARVLQAALSHVVKLGWTEAAMIAGARDIGMSPSIVGSFARKEAELVEFFMDDCLQRLIDLIEAEEGLKN
LILRERIYKLVRARLEMQAPFMSKWAQALSIQAQPANLATSFKQRATLVDEIWHAAGGDTSDIDWYVKRTILGGIYSATEIYMLTDSSPGEFSQVPGL