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HG10007337 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007337
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTATA-box-binding protein
Genome locationChr10:3869857..3870601
RNA-Seq ExpressionHG10007337
SyntenyHG10007337
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006366 - transcription by RNA polymerase II (biological process)
GO:0006413 - translational initiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domainsIPR000814 - TATA-box binding protein
IPR012295 - TBP domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055733.1 TATA-box-binding protein isoform X2 [Cucumis melo var. makuwa]6.9e-2398.28Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG
        MADQGLEGAQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG

KAF3325145.1 TATA-box-binding protein [Carex littledalei]1.3e-2198.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

KAF7822450.1 TATA-box-binding protein [Senna tora]1.5e-2298.25Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKAS
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKAS
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKAS

KAG7022001.1 TATA-box-binding protein [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2396.67Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGFL
        MADQGLEGAQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG L
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGFL

NP_001275090.1 TATA-box-binding protein [Solanum tuberosum]1.3e-2198.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

TrEMBL top hitse value%identityAlignment
A0A0V0HPN8 Putative TATA-box-binding protein-like6.3e-2298.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

A0A3Q7EDH7 Uncharacterized protein6.3e-2298.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

A0A5A7UIK5 TATA-box-binding protein isoform X23.3e-2398.28Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG
        MADQGLEGAQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG

A0A6A4QAH8 TATA-box-binding protein1.1e-2194.74Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKAS
        MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKAS
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKAS

A0A6N2BRF8 Uncharacterized protein6.3e-2298.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

SwissProt top hitse value%identityAlignment
P26357 TATA-box-binding protein1.7e-2498.18Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

P28147 TATA-box-binding protein 15.5e-2392.73Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        M DQGLEG+ PVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

P28148 TATA-box-binding protein 26.5e-2496.36Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQG EG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

P50159 TATA-box-binding protein 27.2e-2392.73Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MA+ GLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

Q42808 TATA-box-binding protein2.5e-2394.55Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

Arabidopsis top hitse value%identityAlignment
AT1G55520.1 TATA binding protein 24.6e-2596.36Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQG EG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

AT1G55520.2 TATA binding protein 24.6e-2596.36Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        MADQG EG+QPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

AT3G13440.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein3.1e-0579.17Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPT
        MADQGLE + P+DL+KHPSGIVPT
Subjt:  MADQGLEGAQPVDLTKHPSGIVPT

AT3G13445.1 TATA binding protein 13.9e-2492.73Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        M DQGLEG+ PVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK

AT3G13445.2 TATA binding protein 13.9e-2492.73Show/hide
Query:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
        M DQGLEG+ PVDL+KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK
Subjt:  MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTACAAAGCATCCTTCTGGGATTGTGCCTACCCTCCAGAACATTGTGTCAACAGTGAATCTGGACTGCAA
GTTGGATCTGAAGGCGATTGCTCTTCAAGCTCGCAATGCTGAATATAATCCCAAGGCAAGTGGCTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTACAAAGCATCCTTCTGGGATTGTGCCTACCCTCCAGAACATTGTGTCAACAGTGAATCTGGACTGCAA
GTTGGATCTGAAGGCGATTGCTCTTCAAGCTCGCAATGCTGAATATAATCCCAAGGCAAGTGGCTTTTTATAA
Protein sequenceShow/hide protein sequence
MADQGLEGAQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGFL