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HG10007348 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007348
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationChr10:3991058..3992374
RNA-Seq ExpressionHG10007348
SyntenyHG10007348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055721.1 uncharacterized protein E6C27_scaffold181G001040 [Cucumis melo var. makuwa]4.7e-4890.27Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTSGSIVET ESKQECR   DDK QENEY IKSSLRKPSLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFE
        FSGKELVEIREFE
Subjt:  FSGKELVEIREFE

XP_004144070.1 uncharacterized protein LOC101217749 [Cucumis sativus]2.2e-5888.89Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRD---DKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTS SIVET ESKQECRD   DK QENEY IKSSLRK SLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRD---DKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        FSGKELVEIREFE SEAEDSDYE EDNRSCICTIL
Subjt:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

XP_016901000.1 PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo]2.4e-6090.37Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTSGSIVET ESKQECR   DDK QENEY IKSSLRKPSLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        FSGKELVEIREFE SEAEDSDYE EDNRSCICTIL
Subjt:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

XP_022147688.1 uncharacterized protein LOC111016556 [Momordica charantia]1.7e-5382.58Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG
        MCKIHCPSSF LCQPSP I  TGSVPL LENSPHLPSEVE+VIGTS SIV+TFE KQECRDDKEQE EY IKSSLRK SL+ G  + KH K+VQWMDFSG
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG

Query:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        KELVEIREFEPSE ED+DYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL

XP_038879679.1 uncharacterized protein LOC120071456 [Benincasa hispida]6.5e-5888.64Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG
        MCKIHCPSSF LCQPSPHIY+TGSVPLDLENSPHLPSEV+SVIG S SIVETFESKQECRDDKE     VIKSSL+KPSLRS + KEKHVKRVQWMDFSG
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG

Query:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        KELVEIREFEPSEAEDSDYEGE NRSCICTIL
Subjt:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL

TrEMBL top hitse value%identityAlignment
A0A0A0M2C9 Uncharacterized protein1.1e-5888.89Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRD---DKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTS SIVET ESKQECRD   DK QENEY IKSSLRK SLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRD---DKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        FSGKELVEIREFE SEAEDSDYE EDNRSCICTIL
Subjt:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

A0A1S4DZ54 uncharacterized protein LOC1034924201.2e-6090.37Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTSGSIVET ESKQECR   DDK QENEY IKSSLRKPSLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        FSGKELVEIREFE SEAEDSDYE EDNRSCICTIL
Subjt:  FSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

A0A5D3CDR2 Uncharacterized protein2.3e-4890.27Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD
        MCKIHCPSSF LCQP+PHIY+TGS+PLDLENS HLPSEVESVIGTSGSIVET ESKQECR   DDK QENEY IKSSLRKPSLRSGVSKEKHVKRVQWMD
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECR---DDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMD

Query:  FSGKELVEIREFE
        FSGKELVEIREFE
Subjt:  FSGKELVEIREFE

A0A6J1D1Z7 uncharacterized protein LOC1110165568.1e-5482.58Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG
        MCKIHCPSSF LCQPSP I  TGSVPL LENSPHLPSEVE+VIGTS SIV+TFE KQECRDDKEQE EY IKSSLRK SL+ G  + KH K+VQWMDFSG
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG

Query:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        KELVEIREFEPSE ED+DYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL

A0A6J1EXK0 uncharacterized protein LOC1114391838.9e-4575Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG
        MCKIHCPSS  LCQPSPHI++TGSV LDL+NSPHLPS    VI TSGS VET E K+    DK  E+E+  KSSLRKP+ RSGVSKEKHVK VQWMDFSG
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSG

Query:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        KEL EIREFE SE EDSDYE EDN SCICTIL
Subjt:  KELVEIREFEPSEAEDSDYEGEDNRSCICTIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22790.1 unknown protein1.2e-0445.45Show/hide
Query:  KRVQWMDFSGKELVEIREFEPSE--AEDSDYEGEDNRSCICTIL
        ++VQW D  G EL ++REFEPSE    D ++E    R+C C I+
Subjt:  KRVQWMDFSGKELVEIREFEPSE--AEDSDYEGEDNRSCICTIL

AT1G34010.1 unknown protein1.1e-0737.8Show/hide
Query:  EQENEYVIKSSLRKPSL-----------RSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDS--DYEGEDNRSCICTIL
        E  N + +KSSL+K S            R GV      ++VQW D  G E+ E+REFEPSE ++S  ++     +SC+CTI+
Subjt:  EQENEYVIKSSLRKPSL-----------RSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDS--DYEGEDNRSCICTIL

AT1G55475.1 unknown protein1.9e-1044.05Show/hide
Query:  ESKQECRDDKEQENEYV-----IKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        E ++E  D KE+E + V     +KSSLRK    S  ++++  K+VQW+D  GKEL EIREFEPS+ +D D   +  ++C+C IL
Subjt:  ESKQECRDDKEQENEYV-----IKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

AT2G33390.1 unknown protein1.1e-0537.93Show/hide
Query:  SIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSK--EKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        +IV    S+ E +  +E+E+E    S    P  + G+S+  +K  + VQW D  G  L E+  +EPSE   SD E +D+ SCICTI+
Subjt:  SIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSK--EKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL

AT3G13480.1 unknown protein2.0e-2037.34Show/hide
Query:  MCKIHCPSSFRLCQPSPHIYATGSVPLDL---------------------ENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENE-----YVIKSS
        +CKI CPS    C+PSPHIYA+GS+ L+                      ++  H+  E   V    G + E    +    + K++E E      ++KSS
Subjt:  MCKIHCPSSFRLCQPSPHIYATGSVPLDL---------------------ENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENE-----YVIKSS

Query:  LRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
        L+K  L S     K  K+VQW+D  GKEL EIREFE SE ED  Y+G+  +SC+C IL
Subjt:  LRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAAGATTCATTGTCCTTCATCCTTTCGCCTTTGCCAACCTTCCCCTCATATATATGCCACTGGATCAGTACCATTGGATTTGGAAAACTCACCACATTTGCCTTC
AGAAGTTGAGTCAGTCATAGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCAAGAGTGTAGAGATGACAAAGAGCAGGAGAATGAGTATGTAATCAAGAGTA
GTTTGAGGAAGCCAAGTTTGCGGTCAGGCGTTTCGAAGGAGAAGCATGTGAAAAGAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGATCAGGGAATTTGAA
CCTAGTGAAGCTGAAGATTCTGATTATGAAGGTGAGGATAACAGGAGCTGCATCTGTACTATTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAAGATTCATTGTCCTTCATCCTTTCGCCTTTGCCAACCTTCCCCTCATATATATGCCACTGGATCAGTACCATTGGATTTGGAAAACTCACCACATTTGCCTTC
AGAAGTTGAGTCAGTCATAGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCAAGAGTGTAGAGATGACAAAGAGCAGGAGAATGAGTATGTAATCAAGAGTA
GTTTGAGGAAGCCAAGTTTGCGGTCAGGCGTTTCGAAGGAGAAGCATGTGAAAAGAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGATCAGGGAATTTGAA
CCTAGTGAAGCTGAAGATTCTGATTATGAAGGTGAGGATAACAGGAGCTGCATCTGTACTATTTTATGA
Protein sequenceShow/hide protein sequence
MCKIHCPSSFRLCQPSPHIYATGSVPLDLENSPHLPSEVESVIGTSGSIVETFESKQECRDDKEQENEYVIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFE
PSEAEDSDYEGEDNRSCICTIL