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HG10007354 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007354
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationChr10:4073468..4073647
RNA-Seq ExpressionHG10007354
SyntenyHG10007354
Gene Ontology termsGO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR039281 - Arabinogalactan protein 3/12/13/14/21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1383.05Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL
        M AMKFEALM+ MVV +M FSSSIVAAQEAPAPSP SDAP+SLPTLM SLAPLVL FFL
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL

KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1277.97Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL
        MEAMKF+ALM+ MVV  M  SS+IVAAQEAPAPSP SDA +SLPTLM SLAPL LGFFL
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL

XP_011660059.1 arabinogalactan protein 13 [Cucumis sativus]1.5e-0666.1Show/hide
Query:  AMKFEALMM-IMVVVLMGFSSS--IVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF
        A +F+ LM+ +MVVVL+  SSS  IVAAQEAPAPSP SDA +S+PTLM S  PLV GFF
Subjt:  AMKFEALMM-IMVVVLMGFSSS--IVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF

XP_022988237.1 arabinogalactan peptide 13-like [Cucurbita maxima]6.4e-1379.66Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL
        MEAMKF+ALM+ MVV  M  SS+IVAAQEAPAPSP SDAP+SLPTLM SLAPL LGFFL
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL

XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]2.9e-1388.52Show/hide
Query:  MEAMKFEAL-MMIMVVVLMGF-SSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL
        MEAMK +AL MMIMVVVLM F SSSIVAAQEAPAPSP SDAPISLPTLM SLAPLVLGFFL
Subjt:  MEAMKFEAL-MMIMVVVLMGF-SSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LWU9 Uncharacterized protein7.4e-0766.1Show/hide
Query:  AMKFEALMM-IMVVVLMGFSSS--IVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF
        A +F+ LM+ +MVVVL+  SSS  IVAAQEAPAPSP SDA +S+PTLM S  PLV GFF
Subjt:  AMKFEALMM-IMVVVLMGFSSS--IVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF

A0A6J1JCI6 arabinogalactan peptide 13-like3.1e-1379.66Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL
        MEAMKF+ALM+ MVV  M  SS+IVAAQEAPAPSP SDAP+SLPTLM SLAPL LGFFL
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL

SwissProt top hitse value%identityAlignment
Q9C8A4 Arabinogalactan protein 211.1e-0450.88Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF
        MEAMK + ++ IMVV  + FS++  A  EAPAPSPTSDA + +P L  S+  L  GF
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF

Q9LJD9 Arabinogalactan protein 127.3e-0448.28Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQ-EAPAPSPTSDAPISLPTLMTSLAPLVLGF
        ME+MK + ++++MV ++   +   VAAQ EAPAPSPTSDA + +P L  S+A L  GF
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQ-EAPAPSPTSDAPISLPTLMTSLAPLVLGF

Q9LVC0 Arabinogalactan protein 145.6e-0448.33Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSS--SIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF
        MEAMK + L ++++V ++ FS+    VAA +APAPSPTSDA   +PT   S+A +  GFF
Subjt:  MEAMKFEALMMIMVVVLMGFSS--SIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF

Arabidopsis top hitse value%identityAlignment
AT1G55330.1 arabinogalactan protein 218.0e-0650.88Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF
        MEAMK + ++ IMVV  + FS++  A  EAPAPSPTSDA + +P L  S+  L  GF
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF

AT3G13520.1 arabinogalactan protein 125.2e-0548.28Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQ-EAPAPSPTSDAPISLPTLMTSLAPLVLGF
        ME+MK + ++++MV ++   +   VAAQ EAPAPSPTSDA + +P L  S+A L  GF
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQ-EAPAPSPTSDAPISLPTLMTSLAPLVLGF

AT4G26320.1 arabinogalactan protein 138.9e-0543.86Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF
        MEAMK    + ++V  +   +    AA EAPAPSPTSDA +++P    S+A L  GF
Subjt:  MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGF

AT5G56540.1 arabinogalactan protein 144.0e-0548.33Show/hide
Query:  MEAMKFEALMMIMVVVLMGFSS--SIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF
        MEAMK + L ++++V ++ FS+    VAA +APAPSPTSDA   +PT   S+A +  GFF
Subjt:  MEAMKFEALMMIMVVVLMGFSS--SIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAATGAAGTTTGAAGCTTTGATGATGATAATGGTGGTTGTTTTAATGGGTTTCTCATCCTCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCCT
ACTTCTGATGCTCCAATTTCTCTTCCAACTTTAATGACTTCTCTTGCTCCTCTTGTTCTTGGATTCTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAATGAAGTTTGAAGCTTTGATGATGATAATGGTGGTTGTTTTAATGGGTTTCTCATCCTCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCCT
ACTTCTGATGCTCCAATTTCTCTTCCAACTTTAATGACTTCTCTTGCTCCTCTTGTTCTTGGATTCTTCCTTTAA
Protein sequenceShow/hide protein sequence
MEAMKFEALMMIMVVVLMGFSSSIVAAQEAPAPSPTSDAPISLPTLMTSLAPLVLGFFL