; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007409 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007409
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationChr10:4690199..4690558
RNA-Seq ExpressionHG10007409
SyntenyHG10007409
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]1.3e-2886.05Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVG
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSLG  GG     +++NHSAVGFPWGVG
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3979.34Show/hide
Query:  MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSL--GGGGGGYNSNHSHNHSAVGFPWGVGFLLLL
        MA ++R     S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV++SPLLLVV VHWLSL  GGGGGG NS +SHN +AVGFPWGVGFLLLL
Subjt:  MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSL--GGGGGGYNSNHSHNHSAVGFPWGVGFLLLL

Query:  LLFPWSAAILLLLLYFFFLTN
        LLFPWSAAILLL+LYFFFLTN
Subjt:  LLFPWSAAILLLLLYFFFLTN

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]1.5e-4088.39Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSLG  GG     +++NHSAVGFPWGVGFLLLLLLFPWS AI
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI

Query:  LLLLLYFFFLTN
        LLLLLYFFFLTN
Subjt:  LLLLLYFFFLTN

XP_015957774.2 uncharacterized protein LOC107481931 [Arachis duranensis]1.1e-1453Show/hide
Query:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF
        +S +RSSS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+VISPLLL++ VHWLS G         S     H A G PWGV F+LLLL F
Subjt:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]5.5e-3275.96Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAILLLLLYFF
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VV+SPLLLVVAVHWLS+GGG  G  +      +AVGFPWGVG LLLL+LFPWSAA+LLLLLYFF
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAILLLLLYFF

Query:  FLTN
        FLTN
Subjt:  FLTN

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein7.1e-4188.39Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSLG  GG     +++NHSAVGFPWGVGFLLLLLLFPWS AI
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI

Query:  LLLLLYFFFLTN
        LLLLLYFFFLTN
Subjt:  LLLLLYFFFLTN

A0A444ZSA4 Uncharacterized protein5.1e-1553Show/hide
Query:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF
        +S +RSSS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+VISPLLL++ VHWLS G         S     H A G PWGV F+LLLL F
Subjt:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like7.1e-4188.39Show/hide
Query:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI
        R+SSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVV+SPLLLVVAVHWLSLG  GG     +++NHSAVGFPWGVGFLLLLLLFPWS AI
Subjt:  RSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAI

Query:  LLLLLYFFFLTN
        LLLLLYFFFLTN
Subjt:  LLLLLYFFFLTN

A0A6J1DUA1 uncharacterized protein LOC1110240802.7e-3275.96Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAILLLLLYFF
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VV+SPLLLVVAVHWLS+GGG  G  +      +AVGFPWGVG LLLL+LFPWSAA+LLLLLYFF
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAILLLLLYFF

Query:  FLTN
        FLTN
Subjt:  FLTN

A0A6P4D1L0 uncharacterized protein LOC1074819315.1e-1553Show/hide
Query:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF
        +S +RSSS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+VISPLLL++ VHWLS G         S     H A G PWGV F+LLLL F
Subjt:  FSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGG--GGGGYNSNHSHNHSAVGFPWGVGFLLLLLLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein6.8e-0435.56Show/hide
Query:  LATIALIIFGFLA---YAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSH------NHSAVGFPWGVGFLLLLLLF
        L    LI+  F+    YA Y+  +   +  F+  ++ SPLLL++AVH+LS   G GG  ++  H       + A G PWGV F+L+ L F
Subjt:  LATIALIIFGFLA---YAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSH------NHSAVGFPWGVGFLLLLLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTTAGCAGATCAAGAAGCTCTTCAAGCTTGAGCTTCTCAGACCAATGGCTTCTTGCAACCATTGCTCTGATAATCTTTGGATTCTTGGCTTATGCTGTTTA
CGACGCTGCTGTTGCCTCGGCTTCGGAGGTGTTCCAAAGGCTCGTCGTCATTTCACCGCTGCTTTTGGTTGTTGCCGTTCACTGGCTATCGCTCGGCGGCGGCGGAGGAG
GATATAATAGCAACCACAGCCACAACCATTCAGCTGTGGGATTTCCATGGGGAGTTGGGTTTCTTCTGCTTTTGCTTCTGTTTCCATGGAGTGCTGCCATTTTGCTGCTT
CTACTTTATTTCTTCTTTCTTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTTAGCAGATCAAGAAGCTCTTCAAGCTTGAGCTTCTCAGACCAATGGCTTCTTGCAACCATTGCTCTGATAATCTTTGGATTCTTGGCTTATGCTGTTTA
CGACGCTGCTGTTGCCTCGGCTTCGGAGGTGTTCCAAAGGCTCGTCGTCATTTCACCGCTGCTTTTGGTTGTTGCCGTTCACTGGCTATCGCTCGGCGGCGGCGGAGGAG
GATATAATAGCAACCACAGCCACAACCATTCAGCTGTGGGATTTCCATGGGGAGTTGGGTTTCTTCTGCTTTTGCTTCTGTTTCCATGGAGTGCTGCCATTTTGCTGCTT
CTACTTTATTTCTTCTTTCTTACTAATTGA
Protein sequenceShow/hide protein sequence
MATFSRSRSSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVISPLLLVVAVHWLSLGGGGGGYNSNHSHNHSAVGFPWGVGFLLLLLLFPWSAAILLL
LLYFFFLTN