; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007495 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007495
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationChr10:6038076..6040446
RNA-Seq ExpressionHG10007495
SyntenyHG10007495
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]1.3e-14096.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE HSDK+NES YRL+DGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]4.3e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]4.3e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]1.2e-13090.41Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+  EMHSDK NESGY L+DGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]8.1e-14096.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNE DGK    DK+NESGYRL++GSEQQNGSSLTN+ASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit6.1e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EA+GKE HSDK+NES YRL+DGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit2.1e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit2.1e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit2.1e-14196.65Show/hide
Query:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM
        MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKM

Query:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE HSDK++ESGYRL+DGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit5.7e-13190.41Show/hide
Query:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+  EMHSDK NESGY L+DGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.5e-2241.67Show/hide
Query:  GSYRQDAQKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDAQKMQHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTN
        LRRRQ+RA+ E++ K IK+RKPYLHESRH HAIRR R  GGRF    + D  E H D  +E    L  G      SS T+
Subjt:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-41.9e-2243.9Show/hide
Query:  TGSPHSAGSYRQD-AQKMQHVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVF
        T S H      +  A+K +  S T P +     ++S     V    +A    PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVF
Subjt:  TGSPHSAGSYRQD-AQKMQHVSSTLPAMHGECLTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVF

Query:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKE
        VNAKQY GILRRRQ+RAK EA  ++IKA+KPY+HESRH HAIRR R  GGRF  AKK   D KE
Subjt:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-35.7e-1935.12Show/hide
Query:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQ-------STQLE
        + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         Q  
Subjt:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ K I+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE

Query:  SRHQHAIRRSRSSGGRF-------AKKNEADGKEMHSDKLNE
        SRH HA++R R SGGRF        +  +A  +E   DKL +
Subjt:  SRHQHAIRRSRSSGGRF-------AKKNEADGKEMHSDKLNE

Q945M9 Nuclear transcription factor Y subunit A-93.2e-4650Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK   +  +  +++
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK

Q9LXV5 Nuclear transcription factor Y subunit A-11.4e-4947.91Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.3e-4750Show/hide
Query:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++D   +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDP--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK   +  +  +++
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDK

AT5G12840.1 nuclear factor Y, subunit A19.8e-5147.91Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A12.2e-5049.06Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A19.8e-5147.91Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A12.2e-5049.06Show/hide
Query:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+     L    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQHVSSTLPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E    +  E G   +  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKLNESGYRLD-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTT
ACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAG
AAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATG
CACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTA
TGGTCATCAGCCCTTGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCAAG
GAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATTAGAAGG
TCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGACGGTTCTGAACA
GCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTT
ACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGACGAAG
AAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCAGCTATG
CACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTA
TGGTCATCAGCCCTTGGGCTACCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAATACCAAG
GAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATTAGAAGG
TCGAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAACGAAGCTGATGGGAAGGAGATGCATTCTGATAAATTAAACGAGAGTGGTTACCGCCTAGATGACGGTTCTGAACA
GCAGAATGGAAGCTCCTTGACAAACAAGGCCTCCGAGTAG
Protein sequenceShow/hide protein sequence
MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAM
HGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRR
SRSSGGRFAKKNEADGKEMHSDKLNESGYRLDDGSEQQNGSSLTNKASE