; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007500 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007500
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPolyprotein
Genome locationChr10:6104104..6104610
RNA-Seq ExpressionHG10007500
SyntenyHG10007500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]1.5e-1946.48Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L  K     S  +C+ D R+ N +DS+L +VEA L DGP +FN+FPNI  SL    +L   L L A V+ FE LP+G   I LM+R CYK     F T
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE
         AL+ES P GKTVFFQ D  +S    V  Q+V+ WDEV   E
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE

KAG6588193.1 hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4465.52Show/hide
Query:  LNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKTRA
        LN K L      +CLRDARHRNLQDSLL MVEANL+DGP YFNVFPNIVESL    +L+++LFLNA+VR+FE LPEGPKNIV+MYR+CYK +K G +TR 
Subjt:  LNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKTRA

Query:  LLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPPP
        LL++P NG+T+FFQ D       N  +Q VTVW+EVQLPENWP P
Subjt:  LLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPPP

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2545.03Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        +++  K     S  +C+RD R   ++DS++ MVE+ L DGPFYFNVFPN+  SL E   + NVL ++  V+ F+ L +G + IV+  R CYK  +  F  
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQND-----NGSSNKKNVLDQRVTVWDEVQLPENWPP
         ALLESP  GKTVFFQ       NG       + Q+VT WD+VQLP NWPP
Subjt:  RALLESPPNGKTVFFQND-----NGSSNKKNVLDQRVTVWDEVQLPENWPP

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]9.3e-2546.58Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L +K     S  +CLRD R   L+DSLL +VE+ L DGPFYFNVFPNI  SL  F  + NVL ++  V+  + +P+G   IV+  R CYK  +  F +
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPP
         AL+ESP  GKTVFFQ +    +  +V+ Q+VT+W++VQLP +WPP
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPP

TYK18873.1 polyprotein [Cucumis melo var. makuwa]2.0e-1946.48Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L  K     S  +C+ D R+ N +DS+L +VEA L DGP +FN+FPNI  SL    +L   L L A V+ FE LP+G   I LM+R CYK     F T
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE
         AL+ES P GKTVFFQ D  +S    V  Q+V+ WDEV   E
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein4.5e-2546.58Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L +K     S  +CLRD R   L+DSLL +VE+ L DGPFYFNVFPNI  SL  F  + NVL ++  V+  + +P+G   IV+  R CYK  +  F +
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPP
         AL+ESP  GKTVFFQ +    +  +V+ Q+VT+W++VQLP +WPP
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPP

A0A0A0LZS0 Uncharacterized protein2.4e-1843.48Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L  K     S  +C+ D R+ N +DS+L +VE+ L DGP +FN+FPNI   +     LE+ + + A V+ FE LP+G   I LM+R CYK       T
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEV
         AL+ES P GKTVFFQ +  +S    V DQ+V+ WDEV
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEV

A0A5A7U9X3 Polyprotein7.4e-2046.48Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L  K     S  +C+ D R+ N +DS+L +VEA L DGP +FN+FPNI  SL    +L   L L A V+ FE LP+G   I LM+R CYK     F T
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE
         AL+ES P GKTVFFQ D  +S    V  Q+V+ WDEV   E
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE

A0A5D3D5V1 Polyprotein9.7e-2046.48Show/hide
Query:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT
        ++L  K     S  +C+ D R+ N +DS+L +VEA L DGP +FN+FPNI  SL    +L   L L A V+ FE LP+G   I LM+R CYK     F T
Subjt:  QSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKRGFKT

Query:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE
         AL+ES P GKTVFFQ D  +S    V  Q+V+ WDEV   E
Subjt:  RALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPE

A0A6A6KEL5 Uncharacterized protein1.9e-1536.76Show/hide
Query:  SAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKR---GFKTRALLESPP
        SA VC+RD RH++  DSLL ++E++L DGP YF+ +PN   S I+   +   L L+ +   + +LP G +NI+L+YRI YKA+       +        P
Subjt:  SAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICYKAIKR---GFKTRALLESPP

Query:  NGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENW
         G T FF  D     K N++  +   W++V LP++W
Subjt:  NGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCCAAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACGAGAAAGCCCTTAAATGTCAAAGTGCTTTTGTGTGTCTTAG
AGATGCAAGACATAGAAATTTACAAGACTCTCTTTTACGGATGGTGGAGGCTAATTTGAGAGATGGCCCTTTTTACTTCAATGTCTTTCCTAACATTGTTGAGTCTCTAA
TTGAGTTTGACCAATTGGAGAATGTGTTGTTTTTGAATGCTGAAGTTAGAGACTTTGAACTCCTTCCTGAAGGTCCTAAGAACATTGTTTTGATGTATAGGATTTGTTAC
AAAGCCATAAAACGTGGGTTCAAGACACGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACTGTGTTTTTCCAAAATGATAATGGGAGTTCTAATAAGAAGAATGTTTT
GGATCAAAGAGTTACTGTGTGGGATGAAGTTCAGCTGCCGGAAAACTGGCCACCGCCTCCGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTCCAAAACAAGTACCACTCAATCCACATTGGAATGGTTCAAATTGGAGTCAAAGCCTTAACGAGAAAGCCCTTAAATGTCAAAGTGCTTTTGTGTGTCTTAG
AGATGCAAGACATAGAAATTTACAAGACTCTCTTTTACGGATGGTGGAGGCTAATTTGAGAGATGGCCCTTTTTACTTCAATGTCTTTCCTAACATTGTTGAGTCTCTAA
TTGAGTTTGACCAATTGGAGAATGTGTTGTTTTTGAATGCTGAAGTTAGAGACTTTGAACTCCTTCCTGAAGGTCCTAAGAACATTGTTTTGATGTATAGGATTTGTTAC
AAAGCCATAAAACGTGGGTTCAAGACACGAGCTTTACTTGAGAGTCCTCCAAATGGAAAAACTGTGTTTTTCCAAAATGATAATGGGAGTTCTAATAAGAAGAATGTTTT
GGATCAAAGAGTTACTGTGTGGGATGAAGTTCAGCTGCCGGAAAACTGGCCACCGCCTCCGCCATAA
Protein sequenceShow/hide protein sequence
MDAPKQVPLNPHWNGSNWSQSLNEKALKCQSAFVCLRDARHRNLQDSLLRMVEANLRDGPFYFNVFPNIVESLIEFDQLENVLFLNAEVRDFELLPEGPKNIVLMYRICY
KAIKRGFKTRALLESPPNGKTVFFQNDNGSSNKKNVLDQRVTVWDEVQLPENWPPPPP