; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007501 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007501
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr10:6112134..6112916
RNA-Seq ExpressionHG10007501
SyntenyHG10007501
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588193.1 hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4444.44Show/hide
Query:  RSCSSKKSNGDHSLEDDEY--VEKGK-SLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTMNIGL
        R  S  KS   H+L+ DEY  VEKGK  L+ W +P +PT KIY   +   F  FS NS ++T EG     N GG+  L  ++      ++  + T++IG+
Subjt:  RSCSSKKSNGDHSLEDDEY--VEKGK-SLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTMNIGL

Query:  VQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFS-TIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKLNQN
        VQIGVK LTR  P NA ++LCL D R   L+DSL+ +VE+NL+DGP YFNVFPNI  SL +  + ++L ++  V+ F+QLP+G + IVV  R CYK+ + 
Subjt:  VQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFS-TIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKLNQN

Query:  NFELEALLESPV-GKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWP
          E   LL++P  G+T+FFQT      N     D  Q VT+W++VQLP NWP
Subjt:  NFELEALLESPV-GKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWP

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]2.0e-9572.59Show/hide
Query:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSS--NSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTM
        MSLFFRSCSSK  + DHSLED+EYVEKG +LVKW MP VP HK+YE + KK    FS+  + SIR TEGQISFGN GG F+L+ Q PS  G +  F++ M
Subjt:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSS--NSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTM

Query:  NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF--STIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCY
        NIGLVQIGVKT+TRKIPSNASIILC+ DNR+EK+EDS+IA+VES L DGPFYFNVFPN+N SLF  S I NVLSVHVLVKGFDQL KGSEPIVV+CRTCY
Subjt:  NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF--STIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCY

Query:  KLNQNNFELEALLESPVGKTVFFQTQILGDHN--NDDDHDVVQKVTMWDQVQLPSNWPP
        KLNQ  F  EALLESPVGKTVFFQTQI+G  N       DVVQKVT WDQVQLPSNWPP
Subjt:  KLNQNNFELEALLESPVGKTVFFQTQILGDHN--NDDDHDVVQKVTMWDQVQLPSNWPP

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]2.6e-10377.13Show/hide
Query:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNS--SIRTTEGQISFGNQGGFFRLFNQNPS--FKGGRSTFFN
        MSLFF+SCSSK   GDHSLE++EYVEKGKSLVKWKMP+VP HKIYEERRK  F IF S +  SIRTTEGQISFGN+GG F+L+ Q PS   +  R +FFN
Subjt:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNS--SIRTTEGQISFGNQGGFFRLFNQNPS--FKGGRSTFFN

Query:  TMNIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTC
        TMNIGLVQIGVKTLT+KIP NASIILCL DNR+EKLEDSL+ALVES L DGPFYFNVFPNINLSL FS+I NVLSVHVLVKG D++PKGS PIVVTCRTC
Subjt:  TMNIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTC

Query:  YKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWPP
        YKLNQN+F  EAL+ESPVGKTVFFQ +I      DDD DVVQKVTMW+QVQLPS+WPP
Subjt:  YKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWPP

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]8.4e-4948.13Show/hide
Query:  SSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKG-GRSTFFNTMNIGLVQIGV
        SS    G HSL+ +EY++KGK+L+KWK+PK+PT KIY   +  PFI F S+  I+T E  +   N    FRL + NP         F+  +N+G++QIGV
Subjt:  SSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKG-GRSTFFNTMNIGLVQIGV

Query:  KTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVL---VKGFDQLPKGSEPIVVTCRTCYKLNQNNFE
        KTLT KIPSNASIILC+ D R +  EDS++ LVES L DGP +FN+FPNI + +F     +L   VL   V+GF+QLP+G+ PI +  RTCYKL  +   
Subjt:  KTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVL---VKGFDQLPKGSEPIVVTCRTCYKLNQNNFE

Query:  LEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV
          AL+ESP GKTVFFQT      N ++     QKV+ WD+V
Subjt:  LEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]9.9e-4243.72Show/hide
Query:  SLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNP---SFKGGRSTFFNTM
        +LF   CSS    G H+L+ +EY++KG +L+KWK+PKVPT KIY   ++ PF  F S+ SI+T E ++S  N    FRL  +NP   SF   R  F+ T+
Subjt:  SLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNP---SFKGGRSTFFNTM

Query:  NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKL
        N+G++QIGVK +T KIPSNASIILC+ D+R E  ED+++ LVESNL                                GF+QLP+G+ PI +  RTCYKL
Subjt:  NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKL

Query:  NQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV
         ++     ALLESP GKTV+FQT +       +    VQKV+ WD+V
Subjt:  NQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein1.3e-10377.13Show/hide
Query:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNS--SIRTTEGQISFGNQGGFFRLFNQNPS--FKGGRSTFFN
        MSLFF+SCSSK   GDHSLE++EYVEKGKSLVKWKMP+VP HKIYEERRK  F IF S +  SIRTTEGQISFGN+GG F+L+ Q PS   +  R +FFN
Subjt:  MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNS--SIRTTEGQISFGNQGGFFRLFNQNPS--FKGGRSTFFN

Query:  TMNIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTC
        TMNIGLVQIGVKTLT+KIP NASIILCL DNR+EKLEDSL+ALVES L DGPFYFNVFPNINLSL FS+I NVLSVHVLVKG D++PKGS PIVVTCRTC
Subjt:  TMNIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTC

Query:  YKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWPP
        YKLNQN+F  EAL+ESPVGKTVFFQ +I      DDD DVVQKVTMW+QVQLPS+WPP
Subjt:  YKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNWPP

A0A0A0LZS0 Uncharacterized protein4.0e-4948.13Show/hide
Query:  SSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKG-GRSTFFNTMNIGLVQIGV
        SS    G HSL+ +EY++KGK+L+KWK+PK+PT KIY   +  PFI F S+  I+T E  +   N    FRL + NP         F+  +N+G++QIGV
Subjt:  SSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKG-GRSTFFNTMNIGLVQIGV

Query:  KTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVL---VKGFDQLPKGSEPIVVTCRTCYKLNQNNFE
        KTLT KIPSNASIILC+ D R +  EDS++ LVES L DGP +FN+FPNI + +F     +L   VL   V+GF+QLP+G+ PI +  RTCYKL  +   
Subjt:  KTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVL---VKGFDQLPKGSEPIVVTCRTCYKLNQNNFE

Query:  LEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV
          AL+ESP GKTVFFQT      N ++     QKV+ WD+V
Subjt:  LEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV

A0A2N9J818 LRRNT_2 domain-containing protein1.2e-2129.08Show/hide
Query:  SLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTMNIG
        S+  RS SS KS  D   E+DE +     L  W +PK+   ++Y  R      +F +   ++T E   +         LF Q    +  R+  +  +++G
Subjt:  SLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTMNIG

Query:  LVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKLNQ
        L+Q+G+K LTR+   NAS++L L+D R    + +L+ +VE+N+  GP +FNV P++ LSL        L++ +   G+  + +GS P+ +  R  YKL +
Subjt:  LVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKLNQ

Query:  NNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNW
         N   +AL + P  +T+  Q       +++D +  + K+  W+ ++LP  W
Subjt:  NNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQVQLPSNW

A0A5A7U9X3 Polyprotein2.8e-3450.59Show/hide
Query:  FRLFNQNPSFKGGRSTFFNTM-NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STIGNVLSVHVLV
        FRL   NP     +   F TM N+G++QIGVKTLT KI SNASIILC+ D R +  EDS++ LVE+ L DGP +FN+FPNI +SLF   +   L +  +V
Subjt:  FRLFNQNPSFKGGRSTFFNTM-NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STIGNVLSVHVLV

Query:  KGFDQLPKGSEPIVVTCRTCYKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV
        +GF+QLP+G+ PI +  RTCYKL  + F   AL+ESP GKTVFFQT        ++    VQKV+ WD+V
Subjt:  KGFDQLPKGSEPIVVTCRTCYKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV

A0A5D3D5V1 Polyprotein3.3e-3551.18Show/hide
Query:  FRLFNQNPSFKGGRSTFFNTM-NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STIGNVLSVHVLV
        FRL   NP     +   F TM N+G++QIGVKTLT KIPSNASIILC+ D R +  EDS++ LVE+ L DGP +FN+FPNI +SLF   +   L +  +V
Subjt:  FRLFNQNPSFKGGRSTFFNTM-NIGLVQIGVKTLTRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STIGNVLSVHVLV

Query:  KGFDQLPKGSEPIVVTCRTCYKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV
        +GF+QLP+G+ PI +  RTCYKL  + F   AL+ESP GKTVFFQT        ++    VQKV+ WD+V
Subjt:  KGFDQLPKGSEPIVVTCRTCYKLNQNNFELEALLESPVGKTVFFQTQILGDHNNDDDHDVVQKVTMWDQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCTTTTTCAGATCTTGCAGCTCCAAGAAATCCAATGGCGATCATTCTTTAGAAGATGATGAATATGTTGAAAAAGGTAAAAGTTTGGTGAAATGGAAGATGCC
AAAAGTCCCAACTCACAAAATCTATGAAGAAAGAAGAAAAAAACCCTTCATTATTTTTTCTTCTAATAGTTCCATCAGAACCACAGAAGGCCAAATCAGTTTTGGAAATC
AAGGAGGATTTTTTAGATTGTTTAATCAAAACCCTTCATTTAAGGGTGGAAGATCAACATTCTTCAACACAATGAACATAGGGCTTGTTCAAATTGGTGTTAAAACCCTA
ACAAGAAAAATCCCTTCAAATGCTTCAATAATTTTGTGTCTAATTGACAATAGAGTTGAAAAGCTTGAAGATTCACTAATTGCTTTAGTTGAATCAAATTTAAGAGATGG
CCCATTTTATTTCAATGTTTTTCCAAACATAAACTTGTCTTTGTTTTCAACAATCGGTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGACCAACTTCCTAAAG
GGAGTGAGCCAATTGTTGTTACATGTAGAACATGTTACAAGTTGAATCAAAACAACTTTGAACTAGAGGCTTTGCTTGAGAGTCCTGTTGGAAAAACAGTGTTTTTTCAG
ACACAGATTCTTGGAGATCATAATAACGATGATGATCATGATGTTGTTCAAAAAGTGACCATGTGGGACCAAGTTCAGTTGCCTTCTAATTGGCCTCCTGGATTCAAAAG
ATGTTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCTTTTTCAGATCTTGCAGCTCCAAGAAATCCAATGGCGATCATTCTTTAGAAGATGATGAATATGTTGAAAAAGGTAAAAGTTTGGTGAAATGGAAGATGCC
AAAAGTCCCAACTCACAAAATCTATGAAGAAAGAAGAAAAAAACCCTTCATTATTTTTTCTTCTAATAGTTCCATCAGAACCACAGAAGGCCAAATCAGTTTTGGAAATC
AAGGAGGATTTTTTAGATTGTTTAATCAAAACCCTTCATTTAAGGGTGGAAGATCAACATTCTTCAACACAATGAACATAGGGCTTGTTCAAATTGGTGTTAAAACCCTA
ACAAGAAAAATCCCTTCAAATGCTTCAATAATTTTGTGTCTAATTGACAATAGAGTTGAAAAGCTTGAAGATTCACTAATTGCTTTAGTTGAATCAAATTTAAGAGATGG
CCCATTTTATTTCAATGTTTTTCCAAACATAAACTTGTCTTTGTTTTCAACAATCGGTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGACCAACTTCCTAAAG
GGAGTGAGCCAATTGTTGTTACATGTAGAACATGTTACAAGTTGAATCAAAACAACTTTGAACTAGAGGCTTTGCTTGAGAGTCCTGTTGGAAAAACAGTGTTTTTTCAG
ACACAGATTCTTGGAGATCATAATAACGATGATGATCATGATGTTGTTCAAAAAGTGACCATGTGGGACCAAGTTCAGTTGCCTTCTAATTGGCCTCCTGGATTCAAAAG
ATGTTCCAAGTAA
Protein sequenceShow/hide protein sequence
MSLFFRSCSSKKSNGDHSLEDDEYVEKGKSLVKWKMPKVPTHKIYEERRKKPFIIFSSNSSIRTTEGQISFGNQGGFFRLFNQNPSFKGGRSTFFNTMNIGLVQIGVKTL
TRKIPSNASIILCLIDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTIGNVLSVHVLVKGFDQLPKGSEPIVVTCRTCYKLNQNNFELEALLESPVGKTVFFQ
TQILGDHNNDDDHDVVQKVTMWDQVQLPSNWPPGFKRCSK