; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007502 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007502
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr10:6127181..6127927
RNA-Seq ExpressionHG10007502
SyntenyHG10007502
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]1.8e-7781.56Show/hide
Query:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS
        M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKI SNASIILCVFDTRNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL 
Subjt:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS

Query:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI
        ESLVLIA+VQGFEQLP+GT PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Subjt:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI

KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]6.1e-6555.2Show/hide
Query:  MPTFFNPCLSSNFGGGS--HALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNV
        M TF  PC SS   GG   HALD+EE+IKKGNNLL WKIPKVPT+KIYK   F F SDPSIKTK+  M+C NG+Q   LI E+PF+  L  KRFYSM NV
Subjt:  MPTFFNPCLSSNFGGGS--HALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNV

Query:  GMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQ
        GMIQIG KTLT KIP NA+I LCVFDTR + FE+SILG+VE+ L                                         TKPI L WRTCYKLQ
Subjt:  GMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQ

Query:  GSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMKQ
         S L +AL+ES  G+TVFFQTDFE S+VAV KVS WD+V+CKV  +   +
Subjt:  GSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMKQ

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]4.9e-10780.16Show/hide
Query:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM
        M TF   C SSNFGGGSH+LDSEEYIKKG NLLKWKIPK+PTTKIYK   F FFSDP IKTKEETM CENGSQ FRLIS NP +    +KRFY+ LN+GM
Subjt:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM

Query:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS
        IQIGVKTLTTKIPSNASIILCVFDTRNDNFE+SILGLVES L DGP+FFNIFPNITM +FHPKL ES VLIA+VQGFEQLP+GT PISLMWRTCYKLQ S
Subjt:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS

Query:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK
         LP AL+ESPQGKTVFFQT+FE S+VA QKVS+WDEV+CKVR+ IMK
Subjt:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK

TYK18873.1 polyprotein [Cucumis melo var. makuwa]2.2e-7882.12Show/hide
Query:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS
        M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKIPSNASIILCVFDTRNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL 
Subjt:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS

Query:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI
        ESLVLIA+VQGFEQLP+GT PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Subjt:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]1.1e-9372.06Show/hide
Query:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM
        M T F PC SSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKR  FTFFSDPSIKT+EE MSCENGSQ FRLI++NP M   ND RFY+ +NVGM
Subjt:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM

Query:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS
        IQIGVK +TTKIPSNASIILCVFD+RN+NFE++ILGLVESNL                                 GFEQLPEGT+PISLMWRTCYKLQ S
Subjt:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS

Query:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK
         LP+ALLESPQGKTV+FQTD + S+VAVQKVSKWDEVVCK+R+IIMK
Subjt:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein4.9e-5246.15Show/hide
Query:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIY--KRKSFTFF----SDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDK-RFY
        M  FF  C S NF  G H+L+ EEY++KG +L+KWK+P+VP  KIY  +RK+  F     +DPSI+T E  +S  N    F+L  + P       +  F+
Subjt:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIY--KRKSFTFF----SDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDK-RFY

Query:  SMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRT
        + +N+G++QIGVKTLT KIP NASIILC+ D R +  E+S+L LVES L DGP +FN+FPNI +SLF   ++  L +  +V+G +++P+G+ PI +  RT
Subjt:  SMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRT

Query:  CYKLQGSDL-PDALLESPQGKTVFFQTDF--EKSEVAVQKVSKWDEV
        CYKL  +D   +AL+ESP GKTVFFQ +   +  +  VQKV+ W++V
Subjt:  CYKLQGSDL-PDALLESPQGKTVFFQTDF--EKSEVAVQKVSKWDEV

A0A0A0LZS0 Uncharacterized protein2.4e-10780.16Show/hide
Query:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM
        M TF   C SSNFGGGSH+LDSEEYIKKG NLLKWKIPK+PTTKIYK   F FFSDP IKTKEETM CENGSQ FRLIS NP +    +KRFY+ LN+GM
Subjt:  MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGM

Query:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS
        IQIGVKTLTTKIPSNASIILCVFDTRNDNFE+SILGLVES L DGP+FFNIFPNITM +FHPKL ES VLIA+VQGFEQLP+GT PISLMWRTCYKLQ S
Subjt:  IQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGS

Query:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK
         LP AL+ESPQGKTVFFQT+FE S+VA QKVS+WDEV+CKVR+ IMK
Subjt:  DLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMK

A0A438I6T6 CCHC-type domain-containing protein2.6e-2936.94Show/hide
Query:  LDSEE--YIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNAS
        ++SEE  Y K  N+L  WK+PKV   +IYK+ +F FF+D +IKT E T+S E   Q  RL+      V  + K  Y+ ++ GMIQ+  K L T++  N +
Subjt:  LDSEE--YIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNAS

Query:  IILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDL-PDALLESPQGKTVF
        I++C+ D R+  + +SI+G V++ L+DGP++F  +PN T+ L    + +S+VL     GF+  P G  P+S++ R  YK   + +   AL  SP+G+T +
Subjt:  IILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDL-PDALLESPQGKTVF

Query:  FQTD-FEKSEVAVQKVSKWDEV
        F +D  +KS+  + K   W +V
Subjt:  FQTD-FEKSEVAVQKVSKWDEV

A0A5A7U9X3 Polyprotein8.8e-7881.56Show/hide
Query:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS
        M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKI SNASIILCVFDTRNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL 
Subjt:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS

Query:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI
        ESLVLIA+VQGFEQLP+GT PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Subjt:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI

A0A5D3D5V1 Polyprotein1.0e-7882.12Show/hide
Query:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS
        M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKIPSNASIILCVFDTRNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL 
Subjt:  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLS

Query:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI
        ESLVLIA+VQGFEQLP+GT PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Subjt:  ESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTTTTTCAATCCATGTTTGAGCTCAAACTTTGGAGGAGGAAGTCATGCTTTAGATAGTGAAGAATACATCAAAAAAGGGAACAATCTATTGAAATGGAAGAT
CCCAAAAGTTCCCACAACCAAAATCTACAAAAGAAAGTCATTCACTTTCTTCTCTGATCCATCCATCAAAACCAAAGAAGAAACAATGTCTTGTGAAAATGGGAGCCAAG
GTTTTAGGTTAATATCTGAAAATCCCTTCATGGTTGGTCTCAATGACAAAAGATTCTACTCCATGTTGAATGTTGGGATGATTCAAATTGGTGTAAAAACTTTGACCACA
AAAATACCTTCAAATGCTTCAATTATTCTATGTGTTTTTGACACTAGAAATGACAATTTTGAAAATTCAATTTTGGGGTTGGTGGAATCAAATCTAAGTGATGGTCCTAT
GTTTTTCAACATATTTCCAAACATTACAATGTCTTTGTTTCATCCTAAGTTGTCGGAGTCTTTGGTTTTGATTGCTATTGTTCAAGGTTTTGAGCAGCTTCCTGAAGGGA
CAAAACCAATTAGTTTAATGTGGAGGACATGTTACAAGCTACAAGGCAGTGATTTGCCAGATGCTTTGCTTGAGAGCCCACAAGGCAAAACTGTGTTTTTTCAAACAGAT
TTTGAGAAGTCCGAGGTTGCTGTCCAGAAGGTTTCAAAATGGGATGAAGTTGTTTGCAAAGTTAGGAGTATTATAATGAAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCTTTTTCAATCCATGTTTGAGCTCAAACTTTGGAGGAGGAAGTCATGCTTTAGATAGTGAAGAATACATCAAAAAAGGGAACAATCTATTGAAATGGAAGAT
CCCAAAAGTTCCCACAACCAAAATCTACAAAAGAAAGTCATTCACTTTCTTCTCTGATCCATCCATCAAAACCAAAGAAGAAACAATGTCTTGTGAAAATGGGAGCCAAG
GTTTTAGGTTAATATCTGAAAATCCCTTCATGGTTGGTCTCAATGACAAAAGATTCTACTCCATGTTGAATGTTGGGATGATTCAAATTGGTGTAAAAACTTTGACCACA
AAAATACCTTCAAATGCTTCAATTATTCTATGTGTTTTTGACACTAGAAATGACAATTTTGAAAATTCAATTTTGGGGTTGGTGGAATCAAATCTAAGTGATGGTCCTAT
GTTTTTCAACATATTTCCAAACATTACAATGTCTTTGTTTCATCCTAAGTTGTCGGAGTCTTTGGTTTTGATTGCTATTGTTCAAGGTTTTGAGCAGCTTCCTGAAGGGA
CAAAACCAATTAGTTTAATGTGGAGGACATGTTACAAGCTACAAGGCAGTGATTTGCCAGATGCTTTGCTTGAGAGCCCACAAGGCAAAACTGTGTTTTTTCAAACAGAT
TTTGAGAAGTCCGAGGTTGCTGTCCAGAAGGTTTCAAAATGGGATGAAGTTGTTTGCAAAGTTAGGAGTATTATAATGAAGCAGTAA
Protein sequenceShow/hide protein sequence
MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTT
KIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTD
FEKSEVAVQKVSKWDEVVCKVRSIIMKQ