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HG10007551 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007551
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger CCCH domain-containing protein 62-like
Genome locationChr10:6925185..6925604
RNA-Seq ExpressionHG10007551
SyntenyHG10007551
Gene Ontology termsGO:0008152 - metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575426.1 Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2458.09Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS
        M+KHA GSLARS REA         TH ENRKSR+EGF +NP QSN SSAGTMLAE+M KLSVD+RK VH HQE P  GNSG+      ++ +P+K  KS
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS

Query:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        D+FIDHSR P+Q Q M++ + N     SQPQMK +P
Subjt:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

KAG7013969.1 Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2458.09Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS
        M+KHA GSLARS REA         TH ENRKSR+EGF +NP QSN SSAGTMLAE+M KLSVD+RK VH HQE P  GNSG+      ++ +P+K  KS
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS

Query:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        D+FIDHSR P+Q Q M++ + N     SQPQMK +P
Subjt:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

XP_008462271.1 PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis melo]2.6e-2555.41Show/hide
Query:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL
        +KHA GSLARSNREA         THKENR+SRKEG+R+NP +SN SSAGTMLAESM KL+VDSR VVH+HQE PS GN GK            + KS +
Subjt:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL

Query:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS
        FID +RLP QHQHMMD+         + N  +    SQPQ K NP  S
Subjt:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS

XP_022954256.1 zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata]3.4e-2558.82Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS
        M+KHA GSLARS REA         TH ENRKSR+EGF +NP QSN SSAGTMLAE+M KLSVD+RK VH HQE P  GNSG+      ++ +P+K  KS
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS

Query:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        D+FIDHSR P+Q Q MM+ + N     SQPQMK +P
Subjt:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

XP_038899462.1 zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]7.4e-2861.19Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD
        M+KHA GSLARSNRE          THKENRKSR EGF+DNP QSN SSAGT L +SM KLSVDSRKVVH+HQEE   GNSGK F     +   ++ KSD
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD

Query:  LFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFN
        LFIDH+RLPFQHQ+            SQPQMK N
Subjt:  LFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFN

TrEMBL top hitse value%identityAlignment
A0A0A0KCF3 Uncharacterized protein1.3e-2257.66Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD
        M+KHA GSLARSNREA         THKENR+ RKEGFR+NP QSN SSAGT+LA SM KLSV+ R VVH+HQE PS GN  K            + KS 
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD

Query:  LFID--HSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        LFID  ++RLPFQHQHM+D+        SQPQ K NP
Subjt:  LFID--HSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

A0A1S3CH36 zinc finger CCCH domain-containing protein 62-like1.3e-2555.41Show/hide
Query:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL
        +KHA GSLARSNREA         THKENR+SRKEG+R+NP +SN SSAGTMLAESM KL+VDSR VVH+HQE PS GN GK            + KS +
Subjt:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL

Query:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS
        FID +RLP QHQHMMD+         + N  +    SQPQ K NP  S
Subjt:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS

A0A5A7V0Q9 Zinc finger CCCH domain-containing protein 62-like1.3e-2555.41Show/hide
Query:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL
        +KHA GSLARSNREA         THKENR+SRKEG+R+NP +SN SSAGTMLAESM KL+VDSR VVH+HQE PS GN GK            + KS +
Subjt:  KKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDL

Query:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS
        FID +RLP QHQHMMD+         + N  +    SQPQ K NP  S
Subjt:  FIDHSRLPFQHQHMMDS---------IHNAKE--LPSQPQMKFNPLTS

A0A6J1GQF0 zinc finger CCCH domain-containing protein 62-like1.7e-2558.82Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS
        M+KHA GSLARS REA         TH ENRKSR+EGF +NP QSN SSAGTMLAE+M KLSVD+RK VH HQE P  GNSG+      ++ +P+K  KS
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSK-PKS

Query:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        D+FIDHSR P+Q Q MM+ + N     SQPQMK +P
Subjt:  DLFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

A0A6J1JT10 zinc finger CCCH domain-containing protein 62-like8.3e-2557.04Show/hide
Query:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD
        M+KHA GSLARS REA         TH ENRKSR+EGF +NP +SN SSAGTMLAE+M KLSVD+RK VH HQE+P  G+SG+    N  K    + KSD
Subjt:  MKKHAGGSLARSNREA---------THKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSD

Query:  LFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP
        +FIDHSR P+Q Q M++ + N     SQPQMK +P
Subjt:  LFIDHSRLPFQHQHMMDSIHNAKELPSQPQMKFNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAACATGCTGGGGGATCACTTGCAAGATCAAATAGGGAGGCAACGCACAAGGAAAATAGGAAATCAAGGAAAGAAGGATTTAGAGACAATCCTTGTCAGTCAAA
TCAATCTTCAGCAGGAACAATGTTAGCTGAATCCATGACGAAGTTATCGGTTGATTCGAGAAAAGTGGTTCATCGACATCAGGAAGAACCTTCGTCCGGTAATTCAGGAA
AGCATTTCAACACCAACAGTCAGAAAATCCATCCAAGCAAACCCAAATCAGATTTGTTCATTGATCATAGTAGACTGCCATTTCAACATCAGCACATGATGGATTCGATA
CACAATGCAAAAGAATTACCTAGCCAACCCCAAATGAAATTCAATCCTCTGACAAGCCTTCAATATACATCCCAGCATTTACAGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAACATGCTGGGGGATCACTTGCAAGATCAAATAGGGAGGCAACGCACAAGGAAAATAGGAAATCAAGGAAAGAAGGATTTAGAGACAATCCTTGTCAGTCAAA
TCAATCTTCAGCAGGAACAATGTTAGCTGAATCCATGACGAAGTTATCGGTTGATTCGAGAAAAGTGGTTCATCGACATCAGGAAGAACCTTCGTCCGGTAATTCAGGAA
AGCATTTCAACACCAACAGTCAGAAAATCCATCCAAGCAAACCCAAATCAGATTTGTTCATTGATCATAGTAGACTGCCATTTCAACATCAGCACATGATGGATTCGATA
CACAATGCAAAAGAATTACCTAGCCAACCCCAAATGAAATTCAATCCTCTGACAAGCCTTCAATATACATCCCAGCATTTACAGGGCTGA
Protein sequenceShow/hide protein sequence
MKKHAGGSLARSNREATHKENRKSRKEGFRDNPCQSNQSSAGTMLAESMTKLSVDSRKVVHRHQEEPSSGNSGKHFNTNSQKIHPSKPKSDLFIDHSRLPFQHQHMMDSI
HNAKELPSQPQMKFNPLTSLQYTSQHLQG