CuGenDBv2

Gene ID	HG10007555
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DUF4228 domain protein
Genome location	Chr10:6996133..6996771
RNA-Seq Expression	HG10007555
Synteny	HG10007555
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056017.1 DUF4228 domain protein [Cucumis melo var. makuwa]

3.4e-109

91.98

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCLISISIS RR RPSAVK+VF+DG TKFL+GN HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDDELLVGETYLVLPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LAMIGAGN+SAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLIS AA+DGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

XP_004139126.1 uncharacterized protein LOC101216872 [Cucumis sativus]

2.5e-104

86.79

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Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCL+SISIS   RRPS VK+VF++G TKFL G+ HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDD+L+ GETYL+LPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LA IGAGN+S EKFSGPCPFEYVRGTNG+VLIKVMPEFIVRLISQAA+DGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

XP_008450347.1 PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]

1.5e-109

92.45

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Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCLISISIS RR RPSAVK+VF+DG TKFL+GN HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDDELLVGETYLVLPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LAMIGAGN+SAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLIS AAVDGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

XP_022961145.1 uncharacterized protein LOC111461744 [Cucurbita moschata]

2.8e-87

77.36

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Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNA+SPCLI  SI++ R R SAVK++FS G T+ L G+ HFAGEIMFQFPDM+VCHA+SFFIGH IPSLAI+D+LL GETYLVLPIDRF+  D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG SKGQVWSP LETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKLKQKEG

XP_038880154.1 uncharacterized protein LOC120071833 [Benincasa hispida]

2.0e-104

89.15

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Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNA SPC +SISISH RRR SAVK++FS+G T+FL GN H AGEIMFQFPDMMVCHAESFFIGHPIPSLAI+D+LL+GETYLVLPIDRFASID+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LAMI AGN SAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAA+DGG G GGGGGFLCSTPELKKHYDQLVG SKGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZV5 Uncharacterized protein

1.2e-104

86.79

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCL+SISIS   RRPS VK+VF++G TKFL G+ HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDD+L+ GETYL+LPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LA IGAGN+S EKFSGPCPFEYVRGTNG+VLIKVMPEFIVRLISQAA+DGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

A0A1S3BP11 uncharacterized protein LOC103491983

7.5e-110

92.45

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCLISISIS RR RPSAVK+VF+DG TKFL+GN HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDDELLVGETYLVLPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LAMIGAGN+SAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLIS AAVDGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

A0A5A7UN34 DUF4228 domain protein

1.7e-109

91.98

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNAVSPCLISISIS RR RPSAVK+VF+DG TKFL+GN HFAGEIMFQFPDMMVCHAESFFIGHPIPSL+IDDELLVGETYLVLPIDRFAS+D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LAMIGAGN+SAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLIS AA+DGGE  GGGGGFLCSTPELKKHYDQLVG +KGQVWSPKLETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFKLKQKEG
Subjt:  RFVGFKLKQKEG

A0A6J1HB88 uncharacterized protein LOC111461744

1.4e-87

77.36

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNA+SPCLI  SI++ R R SAVK++FS G T+ L G+ HFAGEIMFQFPDM+VCHA+SFFIGH IPSLAI+D+LL GETYLVLPIDRF+  D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG SKGQVWSP LETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKLKQKEG

A0A6J1JKY3 uncharacterized protein LOC111485518

1.2e-86

75.94

Show/hide

Query:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS
        MGNA+SPC+I  SI++ R R SAVK++FS G T+ L G+ HFAGEIMFQFPDM+VCHA+SFFIGH IPSLAI+D+LL GETYLVLPIDRF+  D+LSTSS
Subjt:  MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSS

Query:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPF+YVRG NG+ LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG  KGQVWSP LETISEYKIRYSPC
Subjt:  LAMIGAGNVSAEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPC

Query:  RFVGFKLKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKLKQKEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28190.1 unknown protein

3.6e-16

33.15

Show/hide

Query:  VKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFAS-IDILSTSSLAMIGAGNVSAEKF-SGPCPFE
        +K+V SDG  + +        E+   FP   +C ++  +IG   P L+  + L +G  Y +LP D F + +  L+ ++L     G V  +K    P PF 
Subjt:  VKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFAS-IDILSTSSLAMIGAGNVSAEKF-SGPCPFE

Query:  YVRGTNG-RVLIKVMPEFIVRLISQA-------AVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYK
          +G  G R+ I+V  EF+  L+ +          +  EG G G G +C+T +LKK Y QLVG  +   W PKLETI+E K
Subjt:  YVRGTNG-RVLIKVMPEFIVRLISQA-------AVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYK

AT5G12340.1 unknown protein

1.3e-45

49.53

Show/hide

Query:  RRRPSAVKVVFSDGL-TKFLIG-NDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSSLAMIGA------GNV
        RRR   V +VF + + TK L G   H AGEIMF+FPD +VCHA+SF+IG  IP+LA+DD L+ G+TY VLPI+RF    IL+TS L++  +       N 
Subjt:  RRRPSAVKVVFSDGL-TKFLIG-NDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSSLAMIGA------GNV

Query:  SAEKF---SGPCPFEYVRGTNGRVLIKVMPEFIVRLI-------SQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSP
            F   S P PFEY +G NG++LIKV PEFI+ LI        + A   GE S      +C++PELKK YDQLVG ++  +WSP L+TISE+KIR SP
Subjt:  SAEKF---SGPCPFEYVRGTNGRVLIKVMPEFIVRLI-------SQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSP

Query:  CRFVGFKLKQKE
         RF G   KQ E
Subjt:  CRFVGFKLKQKE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGCAATGCAGTCTCTCCATGTCTTATATCCATTTCCATCTCCCATCGCCGCCGCCGTCCCTCCGCCGTGAAGGTTGTCTTTTCCGATGGACTGACCAAATTCCTCAT
CGGAAACGACCACTTCGCCGGCGAGATCATGTTTCAATTCCCAGACATGATGGTCTGCCATGCCGAATCCTTCTTCATCGGTCACCCGATCCCGTCTTTAGCCATCGACG
ACGAGCTTCTCGTTGGTGAAACCTACTTGGTTCTCCCCATCGATAGGTTTGCCTCCATCGACATTCTCTCGACCTCGTCGCTGGCTATGATTGGGGCAGGTAATGTGTCG
GCGGAGAAATTCTCTGGTCCATGTCCGTTCGAGTACGTTCGAGGGACAAATGGGAGAGTTTTGATTAAGGTGATGCCGGAGTTTATTGTTAGGTTAATTTCTCAGGCCGC
CGTGGACGGCGGAGAAGGCAGCGGCGGAGGTGGTGGGTTTCTTTGTAGCACGCCGGAGTTGAAGAAACATTACGATCAACTTGTTGGACCTTCGAAAGGGCAAGTTTGGT
CGCCGAAATTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTCAAACTTAAACAAAAAGAAGGCTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGNAVSPCLISISISHRRRRPSAVKVVFSDGLTKFLIGNDHFAGEIMFQFPDMMVCHAESFFIGHPIPSLAIDDELLVGETYLVLPIDRFASIDILSTSSLAMIGAGNVS
AEKFSGPCPFEYVRGTNGRVLIKVMPEFIVRLISQAAVDGGEGSGGGGGFLCSTPELKKHYDQLVGPSKGQVWSPKLETISEYKIRYSPCRFVGFKLKQKEG

HG10007555 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome