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HG10007586 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007586
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCytochrome c biogenesis CcmF C-terminal-like mitochondrial protein
Genome locationChr10:7674163..7674563
RNA-Seq ExpressionHG10007586
SyntenyHG10007586
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83576.1 hypothetical protein VITISV_021757 [Vitis vinifera]4.0e-3067.46Show/hide
Query:  MRMGVSLAARKHPVLTTLRDTKAQ--RYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGTTSCVGK
        MRMGVSL ARKHPVLTTLRDTKAQ     +RGRD II VRTAPRGVDPASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR        G TS V  
Subjt:  MRMGVSLAARKHPVLTTLRDTKAQ--RYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGTTSCVGK

Query:  AN----FLGFGRRRADMGTRVRAQRN
               LG GR         RA++N
Subjt:  AN----FLGFGRRRADMGTRVRAQRN

OIT31842.1 hypothetical protein A4A49_54044 [Nicotiana attenuata]1.2e-3492.68Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGR
        MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIY+RTAPRGVDPASN+VFDQ TGEFPLPL GQPG ERGGNGLPKKPAR R
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGR

OIT40703.1 hypothetical protein A4A49_63613 [Nicotiana attenuata]2.2e-3698.75Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR
        MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR

PKI33354.1 hypothetical protein CRG98_046251 [Punica granatum]4.7e-3192.41Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA
        MGVSLAARKHPVLTTLRDTKAQ    RGRDDIIYVRTAPRGV+PASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPA
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA

PPS15705.1 hypothetical protein GOBAR_AA04875 [Gossypium barbadense]1.4e-3891.3Show/hide
Query:  MRMGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGT
        MRM VSLA R HPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPAS++VFDQG GEFPLPLAGQPGRERGGNGLPKKPA GR QHRMKGT
Subjt:  MRMGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGT

TrEMBL top hitse value%identityAlignment
A0A2I0HNP4 Uncharacterized protein2.3e-3192.41Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA
        MGVSLAARKHPVLTTLRDTKAQ    RGRDDIIYVRTAPRGV+PASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPA
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPA

A0A2P5YJE0 Uncharacterized protein6.7e-3991.3Show/hide
Query:  MRMGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGT
        MRM VSLA R HPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPAS++VFDQG GEFPLPLAGQPGRERGGNGLPKKPA GR QHRMKGT
Subjt:  MRMGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGT

A0A314KRC5 Uncharacterized protein5.8e-3592.68Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGR
        MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIY+RTAPRGVDPASN+VFDQ TGEFPLPL GQPG ERGGNGLPKKPAR R
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGR

A0A314LGK4 Uncharacterized protein1.1e-3698.75Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR
        MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR
Subjt:  MGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR

A5BTL1 Uncharacterized protein1.9e-3067.46Show/hide
Query:  MRMGVSLAARKHPVLTTLRDTKAQ--RYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGTTSCVGK
        MRMGVSL ARKHPVLTTLRDTKAQ     +RGRD II VRTAPRGVDPASN+VFDQGTGEFPLPLAGQPGRERGGNGLPKKPAR        G TS V  
Subjt:  MRMGVSLAARKHPVLTTLRDTKAQ--RYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGTTSCVGK

Query:  AN----FLGFGRRRADMGTRVRAQRN
               LG GR         RA++N
Subjt:  AN----FLGFGRRRADMGTRVRAQRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTGCTGACCACACTGAGAGACACGAAAGCACAGCGGTACGAAAAGAGAGGTCGTGATGATATCATCTACGT
CCGTACCGCTCCTCGTGGAGTAGATCCCGCATCCAACAAAGTCTTTGACCAGGGAACGGGAGAATTCCCACTACCGCTGGCAGGCCAGCCGGGCCGTGAGCGCGGTGGGA
ACGGGCTTCCCAAAAAGCCAGCCCGGGGCCGGAGTCAGCATAGAATGAAGGGGACGACCAGTTGTGTTGGCAAAGCTAACTTCTTGGGTTTCGGGCGGAGAAGAGCGGAC
ATGGGGACTCGGGTCAGGGCGCAGCGTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTGCTGACCACACTGAGAGACACGAAAGCACAGCGGTACGAAAAGAGAGGTCGTGATGATATCATCTACGT
CCGTACCGCTCCTCGTGGAGTAGATCCCGCATCCAACAAAGTCTTTGACCAGGGAACGGGAGAATTCCCACTACCGCTGGCAGGCCAGCCGGGCCGTGAGCGCGGTGGGA
ACGGGCTTCCCAAAAAGCCAGCCCGGGGCCGGAGTCAGCATAGAATGAAGGGGACGACCAGTTGTGTTGGCAAAGCTAACTTCTTGGGTTTCGGGCGGAGAAGAGCGGAC
ATGGGGACTCGGGTCAGGGCGCAGCGTAACTAA
Protein sequenceShow/hide protein sequence
MRMGVSLAARKHPVLTTLRDTKAQRYEKRGRDDIIYVRTAPRGVDPASNKVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARGRSQHRMKGTTSCVGKANFLGFGRRRAD
MGTRVRAQRN