CuGenDBv2

Gene ID	HG10007598
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP synthase epsilon chain, chloroplastic
Genome location	Chr10:7929813..7930040
RNA-Seq Expression	HG10007598
Synteny	HG10007598
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR001469 - ATP synthase, F1 complex, delta/epsilon subunit IPR020547 - ATP synthase delta/epsilon subunit, C-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

ALO22128.1 AtpE [Cucurbita ficifolia]

7.3e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

ASY96329.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis]

7.3e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

MBC9853674.1 hypothetical protein [Adiantum capillus-veneris]

7.3e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

YP_004841789.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo]

7.3e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

YP_009752081.1 CF1 subunit epsilon [Dendrosicyos socotranus]

7.3e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU14 ATP synthase epsilon chain, chloroplastic

3.5e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

A0A1X9Q1L0 ATP synthase epsilon chain, chloroplastic

3.5e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

A0A218KG49 ATP synthase epsilon chain, chloroplastic

3.5e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

A0A249RZA2 ATP synthase epsilon chain, chloroplastic

3.5e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

G3ETZ1 ATP synthase epsilon chain, chloroplastic

3.5e-30

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

SwissProt top hits

e value

%identity

Alignment

A0ZZ41 ATP synthase epsilon chain, chloroplastic

4.9e-29

91.78

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        MALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q2L911 ATP synthase epsilon chain, chloroplastic

4.9e-29

91.78

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        MALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q49KZ2 ATP synthase epsilon chain, chloroplastic

4.9e-29

90.41

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        MALMGGFARIGNNE+TILVNDAEK SDIDPQEAQ+TLE+AEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q4VZG9 ATP synthase epsilon chain, chloroplastic

9.6e-33

100

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

Q70XZ7 ATP synthase epsilon chain, chloroplastic

4.9e-29

89.33

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
        MALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQTLEIAEANL +A+GKRQTIEANLALRRARTRVEAIN + S
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00470.1 ATP synthase epsilon chain

4.6e-30

91.78

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Query:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        MALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQTLEIAEANLRKA+GKRQTIEANLALRRARTRVEA+N +
Subjt:  MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Sequences

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CDS sequence

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ATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAGGTCACTATTTTAGTAAATGATGCGGAGAAGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCT
TGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTAC
CAAGTTAA

mRNA sequence

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Protein sequence

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MALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS

HG10007598 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome