; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007637 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007637
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase
Genome locationChr10:8897092..8897367
RNA-Seq ExpressionHG10007637
SyntenyHG10007637
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC66671.1 hypothetical protein OsI_32959 [Oryza sativa Indica Group]1.4e-0638.3Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        +K+++ DYE + GQ +N DKS  M S N+   + K+ S  LGI  I++N   LG+P   GR+K K F+ ++E++ + +Q WKE F     K  L
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

KAA3477739.1 reverse transcriptase [Gossypium australe]8.1e-0737.36Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKK
        +K ++ +YE+  GQ +N DKS    SKNV       +  +LG+++S N    LG+P+  GR K + F  I+ER  K LQ W   F   G K
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.2e-0741.05Show/hide
Query:  VKRVLWDYE-VTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        +K +L  YE  + GQ IN+DKS F+VSKN       +I   L +     +   LG+PSQ+GRNK ++F  I++RV K LQ WK   F +G +  L
Subjt:  VKRVLWDYE-VTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

XP_024199277.1 uncharacterized protein LOC112202498 [Rosa chinensis]2.1e-0739.36Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        ++ VL DYE+ LGQ +N  KS+ + SK VCPS  ++I+  LG+    K    LG+P+  GRNK + F  I+ER++K L+ W+        K  L
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

XP_030487425.1 uncharacterized protein LOC115704355 [Cannabis sativa]5.6e-0844.68Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFF-QLGKKRF
        +K VL  YE+  GQ IN DKS   V   +    A +++  LG+ +  N    LGMPS  GRNKH++F KIRE+V   LQ WK   F Q GK  F
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFF-QLGKKRF

TrEMBL top hitse value%identityAlignment
A0A2N9GDN7 Uncharacterized protein1.8e-0741.94Show/hide
Query:  MVKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFF-QLGKK
        +VK +LW YE   GQ +N +K     S N  P  A  I D+ G   +++    LG+PS  GR+K K F+ I  RV K LQ WKE F  Q+GK+
Subjt:  MVKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFF-QLGKK

A0A5B6W7C2 Reverse transcriptase3.9e-0737.36Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKK
        +K ++ +YE+  GQ +N DKS    SKNV       +  +LG+++S N    LG+P+  GR K + F  I+ER  K LQ W   F   G K
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYN----LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKK

A0A6J1DUG8 uncharacterized protein LOC1110241356.0e-0841.05Show/hide
Query:  VKRVLWDYE-VTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        +K +L  YE  + GQ IN+DKS F+VSKN       +I   L +     +   LG+PSQ+GRNK ++F  I++RV K LQ WK   F +G +  L
Subjt:  VKRVLWDYE-VTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGI----KISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

B8BG19 Uncharacterized protein6.7e-0738.3Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        +K+++ DYE + GQ +N DKS  M S N+   + K+ S  LGI  I++N   LG+P   GR+K K F+ ++E++ + +Q WKE F     K  L
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

B9G7V6 Uncharacterized protein1.1e-0638.3Show/hide
Query:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL
        +K+++ DYE   GQ +N DKS  M S N+   + K+ S  LGI  I++N   LG+P   GR+K K F+ ++E++ + +Q WKE F     K  L
Subjt:  VKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIK-ISYN---LGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGAGAGTGCTTTGGGATTATGAAGTGACCTTGGGGCAAACAATTAACGTAGACAAATCAACTTTCATGGTTAGCAAGAATGTTTGCCCTTCGAAAGCAAAGAT
GATTAGTGATGTGTTAGGCATCAAGATCTCTTATAACTTGGGTATGCCTTCTCAATCAGGGAGGAACAAACACAAGATGTTTAAGAAGATTAGAGAAAGGGTTAGCAAGG
TGTTGCAACGTTGGAAAGAGAACTTTTTTCAGCTGGGGAAAAAGAGATTCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAGAGAGTGCTTTGGGATTATGAAGTGACCTTGGGGCAAACAATTAACGTAGACAAATCAACTTTCATGGTTAGCAAGAATGTTTGCCCTTCGAAAGCAAAGAT
GATTAGTGATGTGTTAGGCATCAAGATCTCTTATAACTTGGGTATGCCTTCTCAATCAGGGAGGAACAAACACAAGATGTTTAAGAAGATTAGAGAAAGGGTTAGCAAGG
TGTTGCAACGTTGGAAAGAGAACTTTTTTCAGCTGGGGAAAAAGAGATTCTTATAA
Protein sequenceShow/hide protein sequence
MVKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL