CuGenDBv2

Gene ID	HG10007670
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SART-1 family protein DOT2
Genome location	Chr10:9787946..9788919
RNA-Seq Expression	HG10007670
Synteny	HG10007670
Gene Ontology terms	GO:0000481 - maturation of 5S rRNA (biological process) GO:0009908 - flower development (biological process) GO:0009933 - meristem structural organization (biological process) GO:0010087 - phloem or xylem histogenesis (biological process) GO:0010305 - leaf vascular tissue pattern formation (biological process) GO:0010588 - cotyledon vascular tissue pattern formation (biological process) GO:0045292 - mRNA cis splicing, via spliceosome (biological process) GO:0048528 - post-embryonic root development (biological process) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
InterPro domains	IPR005011 - SNU66/SART1 family

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039246.1 SART-1 family protein DOT2 isoform X2 [Cucumis melo var. makuwa]

9.2e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

XP_008459644.1 PREDICTED: SART-1 family protein DOT2 isoform X2 [Cucumis melo]

9.2e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

XP_011656109.1 SART-1 family protein DOT2 [Cucumis sativus]

9.2e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

XP_016902433.1 PREDICTED: SART-1 family protein DOT2 isoform X1 [Cucumis melo]

9.2e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

XP_022149190.1 SART-1 family protein DOT2 [Momordica charantia]

2.7e-28

86.05

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSK+SRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXY6 Uncharacterized protein

4.5e-29

87.21

Show/hide

Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

A0A1S3CAS5 SART-1 family protein DOT2 isoform X2

4.5e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

A0A1S4E2I4 SART-1 family protein DOT2 isoform X1

4.5e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

A0A5D3BNU7 SART-1 family protein DOT2 isoform X2

4.5e-29

87.21

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGIVDEDE KESKSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

A0A6J1IPE4 SART-1 family protein DOT2

1.3e-28

84.88

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDKRKSKLVGI+DEDE KE+KSKDSRLS LVDYKKEIHIER  E G IMTPKESFR+LSHKFHGK P KMKQEK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

SwissProt top hits

e value

%identity

Alignment

O43290 U4/U6.U5 tri-snRNP-associated protein 1

1.3e-06

51.85

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Query:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        YK ++ IE + E G  +TPKE+FR+LSH+FHGK   KMK E+ +K+  EE  LK
Subjt:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

Q5XIW8 U4/U6.U5 tri-snRNP-associated protein 1

1.3e-06

51.85

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Query:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        YK ++ IE + E G  +TPKE+FR+LSH+FHGK   KMK E+ +K+  EE  LK
Subjt:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

Q9LFE0 SART-1 family protein DOT2

3.7e-20

66.28

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDK+KSKLVGIVD+D  KESK K+S+     D  K+I IER  E G  +TPKE+FR LSHKFHGK P KMK+EK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1

1.3e-06

51.85

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Query:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        YK ++ IE + E G  +TPKE+FR+LSH+FHGK   KMK E+ +K+  EE  LK
Subjt:  YKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

Arabidopsis top hits

e value

%identity

Alignment

AT3G14700.1 SART-1 family

3.6e-07

40.24

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Query:  KRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELK
        K + K+VG+      K++  +D R     D  K+I I+R+++ G IMT KE++R L H FHGK P K KQEK  K+++++ K
Subjt:  KRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELK

AT5G16780.1 SART-1 family

2.6e-21

66.28

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Query:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK
        MDK+KSKLVGIVD+D  KESK K+S+     D  K+I IER  E G  +TPKE+FR LSHKFHGK P KMK+EK +KQYQEELKLK
Subjt:  MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

Sequences

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CDS sequence

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ATGGACAAGAGAAAGAGCAAACTTGTTGGTATAGTAGATGAAGATGAATCGAAGGAATCTAAGTCGAAGGATTCTCGTTTATCTTATCTGGTTGATTACAAAAAGGAGAT
CCACATTGAGAGGATTCATGAATTGGGGTGTATTATGACTCCAAAGGAGTCGTTTCGACGACTCTCTCACAAGTTCCATGGGAAGGAACCTGAAAAAATGAAGCAAGAAA
AGCTCATCAAACAATACCAAGAAGAGTTGAAGTTGAAGTAG

mRNA sequence

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Protein sequence

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MDKRKSKLVGIVDEDESKESKSKDSRLSYLVDYKKEIHIERIHELGCIMTPKESFRRLSHKFHGKEPEKMKQEKLIKQYQEELKLK

HG10007670 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome