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HG10007680 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007680
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionER membrane protein complex subunit 10
Genome locationChr10:9988843..9989215
RNA-Seq ExpressionHG10007680
SyntenyHG10007680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038205.1 ER membrane protein complex subunit 10 [Cucumis melo var. makuwa]7.1e-3897.67Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR
        RTPVFA+DILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAA+QRGPGSSAVRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR

XP_008443658.1 PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo]7.1e-3897.67Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR
        RTPVFA+DILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAA+QRGPGSSAVRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR

XP_011660199.1 ER membrane protein complex subunit 10 [Cucumis sativus]5.5e-3885.44Show/hide
Query:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV
        K+ FN F          RTPVFA+DILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAA+QRGPGSSAV
Subjt:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV

Query:  RRR
        RRR
Subjt:  RRR

XP_022961188.1 ER membrane protein complex subunit 10 [Cucurbita moschata]6.7e-3694.32Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR
        RTP+FADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQV GQAA  GQAQPQQSAAAIQRGPGSS VRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR

XP_038879061.1 ER membrane protein complex subunit 10 [Benincasa hispida]6.0e-3784.47Show/hide
Query:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV
        K+ FN F          RTPVFADDILVGE GEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQ QPQQSA AIQRGPGSSAV
Subjt:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV

Query:  RRR
        RRR
Subjt:  RRR

TrEMBL top hitse value%identityAlignment
A0A1S3B9A8 ER membrane protein complex subunit 103.5e-3897.67Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR
        RTPVFA+DILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAA+QRGPGSSAVRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR

A0A5A7T9U1 ER membrane protein complex subunit 103.5e-3897.67Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR
        RTPVFA+DILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAA+QRGPGSSAVRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR

A0A6J1DA53 ER membrane protein complex subunit 105.5e-3681.55Show/hide
Query:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV
        K+ FN F          RTPVFADDILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AA+QRGPGSSAV
Subjt:  KFRFNGF---------HRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAV

Query:  RRR
        RRR
Subjt:  RRR

A0A6J1HB50 ER membrane protein complex subunit 103.2e-3694.32Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR
        RTP+FADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQV GQAA  GQAQPQQSAAAIQRGPGSS VRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR

A0A6J1JBS8 ER membrane protein complex subunit 103.2e-3694.32Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR
        RTP+FADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQV GQAA  GQAQPQQSAAAIQRGPGSS VRRR
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAIQRGPGSSAVRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65270.1 unknown protein4.9e-2169.12Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE   GQA G Q QP
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP

AT1G65270.2 unknown protein4.9e-2169.12Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE   GQA G Q QP
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP

AT1G65270.3 unknown protein4.9e-2169.12Show/hide
Query:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE   GQA G Q QP
Subjt:  RTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAG-QAQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAGTTTAGATTCAATGGTTTTCACAGAACACCTGTATTTGCCGATGACATTCTTGTTGGTGAGACTGGAGAAGGGGAAGGTGTAAAGCCACCTGAAAAGTCATT
TTGGGCTAAATATTGGATGTACCTGATACCACTTGGATTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTAGTGGCCAAGCAGCAGGAC
AAGCACAGCCACAGCAGTCAGCCGCTGCAATTCAGCGTGGACCAGGGTCTTCTGCAGTAAGACGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAGTTTAGATTCAATGGTTTTCACAGAACACCTGTATTTGCCGATGACATTCTTGTTGGTGAGACTGGAGAAGGGGAAGGTGTAAAGCCACCTGAAAAGTCATT
TTGGGCTAAATATTGGATGTACCTGATACCACTTGGATTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTAGTGGCCAAGCAGCAGGAC
AAGCACAGCCACAGCAGTCAGCCGCTGCAATTCAGCGTGGACCAGGGTCTTCTGCAGTAAGACGACGATAG
Protein sequenceShow/hide protein sequence
MLKFRFNGFHRTPVFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAAGQAQPQQSAAAIQRGPGSSAVRRR