; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007702 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007702
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description5-amino-6-(5-phosphoribosylamino)uracil reductase
Genome locationChr10:10428658..10429053
RNA-Seq ExpressionHG10007702
SyntenyHG10007702
Gene Ontology termsGO:0009231 - riboflavin biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (molecular function)
GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity (molecular function)
GO:0050661 - NADP binding (molecular function)
InterPro domainsIPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038248.1 riboflavin biosynthesis protein PYRR [Cucumis melo var. makuwa]1.2e-4379.84Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   ++ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVAT SG +AG+GFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQV
        YCRG TAFLNLESSECAGDD+AVSALVQV
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQV

XP_011660221.1 riboflavin biosynthesis protein PYRR, chloroplastic [Cucumis sativus]8.2e-4582.03Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   T+ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVATPSGA+AGQGFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQ
        YCRG TAFLNLE SECAGDD+AVSALVQ
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQ

XP_016899778.1 PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like isoform X2 [Cucumis melo]3.5e-4379.69Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   ++ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVAT SG +AG+GFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQ
        YCRG TAFLNLESSECAGDD+AVSALVQ
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQ

XP_022987496.1 riboflavin biosynthesis protein PYRR, chloroplastic-like isoform X1 [Cucurbita maxima]1.2e-4381.2Show/hide
Query:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV
        MIFSL PS  PI   SRPAA   AAVS  TNVNT   T+S SHSLEATFI+RAA+IADKSAG TAPHPN+GCIVATPSGALAGQGFLFGQGTKSAEVQAV
Subjt:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV

Query:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ
        EAAG  CRGATAFLNLES+EC GDDVAVSA VQ
Subjt:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ

XP_022987497.1 riboflavin biosynthesis protein PYRR, chloroplastic-like isoform X2 [Cucurbita maxima]1.2e-4381.2Show/hide
Query:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV
        MIFSL PS  PI   SRPAA   AAVS  TNVNT   T+S SHSLEATFI+RAA+IADKSAG TAPHPN+GCIVATPSGALAGQGFLFGQGTKSAEVQAV
Subjt:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV

Query:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ
        EAAG  CRGATAFLNLES+EC GDDVAVSA VQ
Subjt:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXT0 CMP/dCMP-type deaminase domain-containing protein1.4e-4582.17Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   T+ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVATPSGA+AGQGFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQV
        YCRG TAFLNLE SECAGDD+AVSALVQV
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQV

A0A1S3B8L1 5-amino-6-(5-phosphoribosylamino)uracil reductase1.7e-4379.69Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   ++ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVAT SG +AG+GFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQ
        YCRG TAFLNLESSECAGDD+AVSALVQ
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQ

A0A5A7T5V6 Riboflavin biosynthesis protein PYRR5.7e-4479.84Show/hide
Query:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG
        MIFSL PS+ PI  FSRPAAAA+STST   ++ S   +SLE+TFIRRAA+IADKSAGFTAPHPNYGCIVAT SG +AG+GFLFGQGTKSAEVQAVE AG 
Subjt:  MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGG

Query:  YCRGATAFLNLESSECAGDDVAVSALVQV
        YCRG TAFLNLESSECAGDD+AVSALVQV
Subjt:  YCRGATAFLNLESSECAGDDVAVSALVQV

A0A6J1JAI8 5-amino-6-(5-phosphoribosylamino)uracil reductase5.7e-4481.2Show/hide
Query:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV
        MIFSL PS  PI   SRPAA   AAVS  TNVNT   T+S SHSLEATFI+RAA+IADKSAG TAPHPN+GCIVATPSGALAGQGFLFGQGTKSAEVQAV
Subjt:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV

Query:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ
        EAAG  CRGATAFLNLES+EC GDDVAVSA VQ
Subjt:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ

A0A6J1JEE4 5-amino-6-(5-phosphoribosylamino)uracil reductase5.7e-4481.2Show/hide
Query:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV
        MIFSL PS  PI   SRPAA   AAVS  TNVNT   T+S SHSLEATFI+RAA+IADKSAG TAPHPN+GCIVATPSGALAGQGFLFGQGTKSAEVQAV
Subjt:  MIFSLAPSNFPITSFSRPAA---AAVSTSTNVNT--TTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAV

Query:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ
        EAAG  CRGATAFLNLES+EC GDDVAVSA VQ
Subjt:  EAAGGYCRGATAFLNLESSECAGDDVAVSALVQ

SwissProt top hitse value%identityAlignment
B6TRH4 Riboflavin biosynthesis protein PYRD, chloroplastic6.6e-0533.66Show/hide
Query:  ITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNL
        + S +RP  AA + S        +     +A ++RR  ++A K+AG T+P+P  GC++    G + G+GF    G   AEV A+  AG     ATA+++L
Subjt:  ITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNL

Query:  E
        E
Subjt:  E

K7WIZ6 Riboflavin biosynthesis protein PYRR, chloroplastic3.3e-2046.22Show/hide
Query:  RPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATP-------SGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFL
        R + A  + S+ V  + S  SH+ +A  +RRAAD+AD+SAG T+PHPN+GC++A P          + G+GFL+ QGT  AE+ A + AG + RG TA+L
Subjt:  RPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATP-------SGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFL

Query:  NLESSECAGDDVAVSALVQ
        NLE  +C GD+ AV +LVQ
Subjt:  NLESSECAGDDVAVSALVQ

P25539 Riboflavin biosynthesis protein RibD1.1e-0436.23Show/hide
Query:  FIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLE
        ++ RA  +A +    T P+PN GC++    G + G+G+    G   AEV A+  AG   +GATA++ LE
Subjt:  FIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLE

P44326 Riboflavin biosynthesis protein RibD3.5e-0639.19Show/hide
Query:  SLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLE
        S +  F++RA D+A K    T P+P+ GC++   +G + G+GF F  G   AE  A+  AG   +GATA++ LE
Subjt:  SLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLE

Q9STY4 Riboflavin biosynthesis protein PYRR, chloroplastic2.3e-2656.6Show/hide
Query:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA
        +  +T  N   S   H+ +A FIRRAAD+++ SAG T+PHPN+GC++AT SG +AG+G+L+ QGTK AE  AVEAAG + RGATA+LN+E  +C GD  A
Subjt:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA

Query:  VSALVQ
        VSALVQ
Subjt:  VSALVQ

Arabidopsis top hitse value%identityAlignment
AT3G47390.1 cytidine/deoxycytidylate deaminase family protein1.7e-2756.6Show/hide
Query:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA
        +  +T  N   S   H+ +A FIRRAAD+++ SAG T+PHPN+GC++AT SG +AG+G+L+ QGTK AE  AVEAAG + RGATA+LN+E  +C GD  A
Subjt:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA

Query:  VSALVQ
        VSALVQ
Subjt:  VSALVQ

AT3G47390.2 cytidine/deoxycytidylate deaminase family protein1.7e-2756.6Show/hide
Query:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA
        +  +T  N   S   H+ +A FIRRAAD+++ SAG T+PHPN+GC++AT SG +AG+G+L+ QGTK AE  AVEAAG + RGATA+LN+E  +C GD  A
Subjt:  VSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLNLESSECAGDDVA

Query:  VSALVQ
        VSALVQ
Subjt:  VSALVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTCTCTTTAGCCCCTTCTAATTTCCCCATAACCAGTTTCTCAAGGCCGGCGGCGGCGGCGGTCTCCACCTCTACAAATGTCAACACCACCACGAGTTCCGTCTC
CCATTCCTTAGAAGCCACATTCATCCGCCGCGCCGCCGATATCGCCGATAAATCCGCCGGATTCACAGCTCCACATCCCAACTATGGCTGCATTGTCGCTACTCCTTCCG
GCGCTCTTGCCGGACAGGGCTTCCTCTTTGGCCAGGGCACCAAATCGGCTGAGGTTCAGGCCGTGGAAGCAGCCGGCGGATACTGCCGTGGAGCTACCGCGTTTCTTAAT
TTGGAGTCCAGTGAATGCGCCGGCGACGATGTTGCGGTTTCTGCTTTGGTACAGGTTTGGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTCTCTTTAGCCCCTTCTAATTTCCCCATAACCAGTTTCTCAAGGCCGGCGGCGGCGGCGGTCTCCACCTCTACAAATGTCAACACCACCACGAGTTCCGTCTC
CCATTCCTTAGAAGCCACATTCATCCGCCGCGCCGCCGATATCGCCGATAAATCCGCCGGATTCACAGCTCCACATCCCAACTATGGCTGCATTGTCGCTACTCCTTCCG
GCGCTCTTGCCGGACAGGGCTTCCTCTTTGGCCAGGGCACCAAATCGGCTGAGGTTCAGGCCGTGGAAGCAGCCGGCGGATACTGCCGTGGAGCTACCGCGTTTCTTAAT
TTGGAGTCCAGTGAATGCGCCGGCGACGATGTTGCGGTTTCTGCTTTGGTACAGGTTTGGGAATAA
Protein sequenceShow/hide protein sequence
MIFSLAPSNFPITSFSRPAAAAVSTSTNVNTTTSSVSHSLEATFIRRAADIADKSAGFTAPHPNYGCIVATPSGALAGQGFLFGQGTKSAEVQAVEAAGGYCRGATAFLN
LESSECAGDDVAVSALVQVWE