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HG10007762 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007762
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:12482348..12482704
RNA-Seq ExpressionHG10007762
SyntenyHG10007762
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876525.1 nucleolar protein 58-like [Benincasa hispida]1.7e-0441.28Show/hide
Query:  TSSNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKLHLRSVLAATSLEEKTSVDSNEGPVNMK----------EETKEEKKKE
        T S+ SE + +D+KEVFGSIL N+EK GGL + GVV QP   K       EK   RS L     +E T V S EG + +           EE +E+KKK+
Subjt:  TSSNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKLHLRSVLAATSLEEKTSVDSNEGPVNMK----------EETKEEKKKE

Query:  DKRRRKEER
         K++ KE++
Subjt:  DKRRRKEER

XP_038885790.1 uncharacterized protein LOC120076082 [Benincasa hispida]2.2e-0442.34Show/hide
Query:  LTSSNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKL----HLRSVLAATSLEEKTSVDSNEGPV---------NMKEETKEE
        L  S  SE + +D+KEVFGSIL N+EK GGL E GVV QP   +   V   E++      RS LA    EE T V S EGP+          M+ E  EE
Subjt:  LTSSNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKL----HLRSVLAATSLEEKTSVDSNEGPV---------NMKEETKEE

Query:  KKKEDKRRRKE
         KK+ K + K+
Subjt:  KKKEDKRRRKE

XP_038902468.1 translation initiation factor IF-2-like [Benincasa hispida]4.9e-0441.51Show/hide
Query:  SNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKL----HLRSVLAATSLEEKTSVDSNEGPVNMK-EETKEEKKKEDKRRRKE
        S  SE + +D+KEVFGSIL N+EK+GGL E GV+ QP   +   V   EK+      RS L     +E T V+S EGP+ +  EE   EK+ E+   +K+
Subjt:  SNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKL----HLRSVLAATSLEEKTSVDSNEGPVNMK-EETKEEKKKEDKRRRKE

Query:  ERKIEK
        ++K  K
Subjt:  ERKIEK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCATCCAGTAGTCTTGTGCTGGTCGCACATATACTGCTAACATCCTCAAACGCAAGTGAGGTCCGGACAGAAGACGAAAAAGAGGTGTTTGGCAGCATCCTAAG
AAATATTGAGAAGGATGGTGGGTTGGTTGAAGTTGGAGTAGTTGGCCAGCCAGCAAAGGAAAAGGCTACCAAGGTAAGCCCAGAAGAGAAGTTGCACCTAAGGTCTGTCC
TTGCGGCCACTAGCCTTGAAGAGAAAACGTCAGTAGACTCTAATGAGGGGCCCGTTAATATGAAAGAGGAAACGAAGGAAGAGAAAAAGAAAGAAGACAAGAGAAGGAGG
AAGGAAGAAAGAAAGATAGAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCATCCAGTAGTCTTGTGCTGGTCGCACATATACTGCTAACATCCTCAAACGCAAGTGAGGTCCGGACAGAAGACGAAAAAGAGGTGTTTGGCAGCATCCTAAG
AAATATTGAGAAGGATGGTGGGTTGGTTGAAGTTGGAGTAGTTGGCCAGCCAGCAAAGGAAAAGGCTACCAAGGTAAGCCCAGAAGAGAAGTTGCACCTAAGGTCTGTCC
TTGCGGCCACTAGCCTTGAAGAGAAAACGTCAGTAGACTCTAATGAGGGGCCCGTTAATATGAAAGAGGAAACGAAGGAAGAGAAAAAGAAAGAAGACAAGAGAAGGAGG
AAGGAAGAAAGAAAGATAGAGAAATGA
Protein sequenceShow/hide protein sequence
MVPSSSLVLVAHILLTSSNASEVRTEDEKEVFGSILRNIEKDGGLVEVGVVGQPAKEKATKVSPEEKLHLRSVLAATSLEEKTSVDSNEGPVNMKEETKEEKKKEDKRRR
KEERKIEK