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HG10007767 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007767
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant transposase
Genome locationChr10:12618672..12619560
RNA-Seq ExpressionHG10007767
SyntenyHG10007767
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058324.1 uncharacterized protein E6C27_scaffold409G00010 [Cucumis melo var. makuwa]1.6e-3776.42Show/hide
Query:  QPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYA
        Q PKK +GPTK+KT+A EE +K++IT+N++GQPIG+ S+GL+SFLGPLVREVVPMTL+D RKLSTR KEILWTSIQA S KFKSMKK++LPHTCSRK YA
Subjt:  QPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYA

Query:  RLAEDM
        RLAEDM
Subjt:  RLAEDM

KAA0060466.1 Plant transposase [Cucumis melo var. makuwa]2.6e-3540.74Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G +  M+G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E +N+ E  M+Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------
         +GPTK+K IAIEE NK+DIT++++GQPIG+ SIGL+SFLG LVRE+VP+TL D RKLSTR KEILWTSIQ                             
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------

Query:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM
                                                A SEKFKSMKK +LPHTCSRK YARLAE+M
Subjt:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM

TYK00394.1 Plant transposase [Cucumis melo var. makuwa]1.7e-3963.83Show/hide
Query:  SRGQVSPILERSQ---------DEENVNLPEQIMKQPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLST
        S+G VSPI+E SQ         +  +  L   +  Q PKK +GPTK+KT+A EE +K++IT+N++GQPIG+ S+GL+SFLGPLVREVVPMTL+D RKLST
Subjt:  SRGQVSPILERSQ---------DEENVNLPEQIMKQPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLST

Query:  RLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAEDM
        R KEILWTSIQA S KFKSMKK++LPHTCSRK YARL EDM
Subjt:  RLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAEDM

XP_016901236.1 PREDICTED: uncharacterized protein LOC103493280 isoform X3 [Cucumis melo]7.5e-3540.37Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G +  M+G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E +N+ E  M+Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------
         +GPTK+K IAIEE NK+DIT++++GQPIG+ SIGL+SFLG LVRE+VP+TL D RKLSTR KEILWTSIQ                             
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------

Query:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM
                                                A SEKFKSMKK +LPHTCSRK YARL E+M
Subjt:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM

XP_016901238.1 PREDICTED: uncharacterized protein LOC103493280 isoform X5 [Cucumis melo]7.5e-3540.37Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G +  M+G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E +N+ E  M+Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------
         +GPTK+K IAIEE NK+DIT++++GQPIG+ SIGL+SFLG LVRE+VP+TL D RKLSTR KEILWTSIQ                             
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------

Query:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM
                                                A SEKFKSMKK +LPHTCSRK YARL E+M
Subjt:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM

TrEMBL top hitse value%identityAlignment
A0A0A0L5I2 Transposase_23 domain-containing protein1.7e-3751.23Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G + E +G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E VN+ E   +Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAED
         +GPTK K IAIEE NK+ +T++++GQPI + SIGL+SFLGPLV EVVP+TL D RKLSTR KEILWTSIQA SEKFKSMK+ +LP T  RKSY RLAE+
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAED

Query:  MVL
        M +
Subjt:  MVL

A0A1S4DZ36 uncharacterized protein LOC103493280 isoform X13.6e-3540.37Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G +  M+G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E +N+ E  M+Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------
         +GPTK+K IAIEE NK+DIT++++GQPIG+ SIGL+SFLG LVRE+VP+TL D RKLSTR KEILWTSIQ                             
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------

Query:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM
                                                A SEKFKSMKK +LPHTCSRK YARL E+M
Subjt:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM

A0A5A7UT16 Uncharacterized protein7.8e-3876.42Show/hide
Query:  QPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYA
        Q PKK +GPTK+KT+A EE +K++IT+N++GQPIG+ S+GL+SFLGPLVREVVPMTL+D RKLSTR KEILWTSIQA S KFKSMKK++LPHTCSRK YA
Subjt:  QPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYA

Query:  RLAEDM
        RLAEDM
Subjt:  RLAEDM

A0A5D3BM96 Plant transposase8.3e-4063.83Show/hide
Query:  SRGQVSPILERSQ---------DEENVNLPEQIMKQPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLST
        S+G VSPI+E SQ         +  +  L   +  Q PKK +GPTK+KT+A EE +K++IT+N++GQPIG+ S+GL+SFLGPLVREVVPMTL+D RKLST
Subjt:  SRGQVSPILERSQ---------DEENVNLPEQIMKQPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLST

Query:  RLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAEDM
        R KEILWTSIQA S KFKSMKK++LPHTCSRK YARL EDM
Subjt:  RLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAEDM

A0A5D3D4T6 Plant transposase1.2e-3540.74Show/hide
Query:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK
        ED + G +  M+G+ I NKL  D SQD                                         SRGQVSPIL+RSQ+  E +N+ E  M+Q PKK
Subjt:  EDNDSGMLGEMKGNQIANKLCGDGSQD-----------------------------------------SRGQVSPILERSQD-EENVNLPEQIMKQPPKK

Query:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------
         +GPTK+K IAIEE NK+DIT++++GQPIG+ SIGL+SFLG LVRE+VP+TL D RKLSTR KEILWTSIQ                             
Subjt:  CKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMTLHDCRKLSTRLKEILWTSIQ-----------------------------

Query:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM
                                                A SEKFKSMKK +LPHTCSRK YARLAE+M
Subjt:  ----------------------------------------AISEKFKSMKKKKLPHTCSRKSYARLAEDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAATGATAGTGGAATGTTGGGTGAGATGAAAGGAAATCAAATTGCAAATAAGTTGTGCGGTGATGGATCTCAAGATTCTAGGGGTCAAGTCTCACCAATTTT
AGAAAGATCACAAGATGAAGAGAATGTCAATCTTCCTGAACAAATTATGAAACAACCCCCCAAGAAATGTAAAGGCCCTACAAAAATTAAAACTATTGCCATTGAGGAAC
ACAATAAGATGGATATAACATATAATGAGTATGGGCAACCAATTGGGAAGACTTCAATAGGATTGGCTTCATTTTTAGGTCCACTCGTGAGAGAGGTAGTACCTATGACC
TTACACGATTGCAGGAAATTGTCTACTAGATTGAAAGAAATTTTGTGGACATCAATCCAAGCAATAAGTGAAAAATTTAAGTCCATGAAGAAGAAGAAACTTCCACATAC
ATGTAGTCGGAAGAGTTATGCTCGATTGGCAGAAGATATGGTATTGATTATTGTGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACAATGATAGTGGAATGTTGGGTGAGATGAAAGGAAATCAAATTGCAAATAAGTTGTGCGGTGATGGATCTCAAGATTCTAGGGGTCAAGTCTCACCAATTTT
AGAAAGATCACAAGATGAAGAGAATGTCAATCTTCCTGAACAAATTATGAAACAACCCCCCAAGAAATGTAAAGGCCCTACAAAAATTAAAACTATTGCCATTGAGGAAC
ACAATAAGATGGATATAACATATAATGAGTATGGGCAACCAATTGGGAAGACTTCAATAGGATTGGCTTCATTTTTAGGTCCACTCGTGAGAGAGGTAGTACCTATGACC
TTACACGATTGCAGGAAATTGTCTACTAGATTGAAAGAAATTTTGTGGACATCAATCCAAGCAATAAGTGAAAAATTTAAGTCCATGAAGAAGAAGAAACTTCCACATAC
ATGTAGTCGGAAGAGTTATGCTCGATTGGCAGAAGATATGGTATTGATTATTGTGACTTAA
Protein sequenceShow/hide protein sequence
MEDNDSGMLGEMKGNQIANKLCGDGSQDSRGQVSPILERSQDEENVNLPEQIMKQPPKKCKGPTKIKTIAIEEHNKMDITYNEYGQPIGKTSIGLASFLGPLVREVVPMT
LHDCRKLSTRLKEILWTSIQAISEKFKSMKKKKLPHTCSRKSYARLAEDMVLIIVT