CuGenDBv2

Gene ID	HG10007796
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SAP domain-containing protein
Genome location	Chr10:13578339..13582626
RNA-Seq Expression	HG10007796
Synteny	HG10007796
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0044260 - cellular macromolecule metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588298.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-19

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

KAG7020857.1 hypothetical protein SDJN02_17545, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-20

98.15

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Query:  MTDYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        MTDYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  MTDYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

XP_023006519.1 uncharacterized protein LOC111499221 isoform X1 [Cucurbita maxima]

1.9e-19

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

XP_023531020.1 uncharacterized protein LOC111793400 isoform X2 [Cucurbita pepo subsp. pepo]

1.9e-19

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

XP_038879291.1 uncharacterized protein LOC120071230 [Benincasa hispida]

1.9e-19

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8T6 uncharacterized protein LOC103487261 isoform X1

9.1e-20

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

A0A6J1EQ88 uncharacterized protein LOC111436825 isoform X1

9.1e-20

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

A0A6J1EWQ7 uncharacterized protein LOC111436825 isoform X2

9.1e-20

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

A0A6J1KW34 uncharacterized protein LOC111499221 isoform X2

9.1e-20

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

A0A6J1L2D9 uncharacterized protein LOC111499221 isoform X1

9.1e-20

98.08

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Query:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        DYMKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKRLQPNMRTYA
Subjt:  DYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G04260.1 plastid transcriptionally active 3

3.6e-21

90.2

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Query:  YMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA
        +MKPDTETYNWVIQAYTRAESYD RVQDVAELLGMMVEDHKR+QPN++TYA
Subjt:  YMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

Sequences

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CDS sequence

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ATGACAGATTACATGAAGCCCGATACTGAGACATATAATTGGGTGATTCAAGCATATACAAGGGCTGAATCTTATGATAGTAGGGTGCAAGATGTTGCCGAATTGCTTGG
CATGATGGTTGAAGACCACAAGCGTCTACAGCCAAACATGAGAACCTATGCGTAA

mRNA sequence

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ATGACAGATTACATGAAGCCCGATACTGAGACATATAATTGGGTGATTCAAGCATATACAAGGGCTGAATCTTATGATAGTAGGGTGCAAGATGTTGCCGAATTGCTTGG
CATGATGGTTGAAGACCACAAGCGTCTACAGCCAAACATGAGAACCTATGCGTAA

Protein sequence

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MTDYMKPDTETYNWVIQAYTRAESYDSRVQDVAELLGMMVEDHKRLQPNMRTYA

HG10007796 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome