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HG10007801 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007801
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein PIR
Genome locationChr10:13662161..13666358
RNA-Seq ExpressionHG10007801
SyntenyHG10007801
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590304.1 Protein PIR, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2677.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
TYK10097.1 protein PIR [Cucumis melo var. makuwa]1.5e-2677.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
XP_022961250.1 protein PIR isoform X1 [Cucurbita moschata]1.5e-2677.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
XP_022988006.1 protein PIR isoform X1 [Cucurbita maxima]1.5e-2677.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
XP_038878720.1 protein PIR [Benincasa hispida]1.5e-2677.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
TrEMBL top hitse value%identityAlignment
A0A0A0LWG4 DUF1394 domain-containing protein1.6e-2676.14Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +++++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
A0A1S3BQV7 protein PIR7.3e-2777.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
A0A5D3CDP3 Protein PIR7.3e-2777.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
A0A6J1H9U6 protein PIR isoform X17.3e-2777.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
A0A6J1JL09 protein PIR isoform X17.3e-2777.27Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQL +A+++ G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
SwissProt top hitse value%identityAlignment
Q5S2C3 Protein PIR9.5e-2465.91Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPIEYSDV+AYRLSL+EDTKALNQL + ++  G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
Arabidopsis top hitse value%identityAlignment
AT5G18410.1 transcription activators6.8e-2565.91Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPIEYSDV+AYRLSL+EDTKALNQL + ++  G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
AT5G18410.2 transcription activators6.8e-2565.91Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPIEYSDV+AYRLSL+EDTKALNQL + ++  G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
AT5G18410.3 transcription activators6.8e-2565.91Show/hide
Query:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS
        MAVPVEEAIAALSTFSLED+QPE+QGP V VS ER AT+SPIEYSDV+AYRLSL+EDTKALNQL + ++  G    ++ +T+++  K+
Subjt:  MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTCCCGTCGAAGAAGCCATTGCTGCGTTGTCCACATTCTCCCTTGAGGATGATCAGCCAGAGTTGCAAGGACCGGGCGTTTGGGTGTCAACTGAGAGAGGCGC
AACTGAGAGTCCAATAGAGTATAGCGATGTTTCCGCGTATCGTCTATCCCTAGCAGAAGACACCAAAGCTCTCAATCAGTTGGTCTCAGCAGTTTTGAACGTGGGGATAG
CTCCACTAGCTCTGTCGCACACATGGAAGAACGTGTCGAAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTCCCGTCGAAGAAGCCATTGCTGCGTTGTCCACATTCTCCCTTGAGGATGATCAGCCAGAGTTGCAAGGACCGGGCGTTTGGGTGTCAACTGAGAGAGGCGC
AACTGAGAGTCCAATAGAGTATAGCGATGTTTCCGCGTATCGTCTATCCCTAGCAGAAGACACCAAAGCTCTCAATCAGTTGGTCTCAGCAGTTTTGAACGTGGGGATAG
CTCCACTAGCTCTGTCGCACACATGGAAGAACGTGTCGAAGAGCTAG
Protein sequenceShow/hide protein sequence
MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKALNQLVSAVLNVGIAPLALSHTWKNVSKS