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HG10007804 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007804
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationChr10:13731706..13733764
RNA-Seq ExpressionHG10007804
SyntenyHG10007804
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044281 - small molecule metabolic process (biological process)
GO:1901564 - organonitrogen compound metabolic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036035.1 putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa]7.5e-1838.02Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ
        ME   CK++   YCIW E    F+ED+EAC+ +  S S L W    IS++L+   +    + G    G  R++KF+  SGWVL C  WP+ GG F +   
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ

Query:  EGIAQKGWISFLSMIKDFIQK
         G  Q+GW+S   M++ F++K
Subjt:  EGIAQKGWISFLSMIKDFIQK

KAA0063979.1 hypothetical protein E6C27_scaffold616G001380 [Cucumis melo var. makuwa]4.2e-1342.53Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVA
        ME  S K+    YCIW +   F +ED++  K L +S++ L WF+  + D++Q   + + L+NGRD+ G TRLTKFR +  W++RCVA
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVA

KGN51638.2 hypothetical protein Csa_008823 [Cucumis sativus]1.0e-1140.22Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDG
        ME AS K+    +C+W E  +F VE ++A   + +SE+HL+ FL  I+ +++GS++R+ L+ G    G  +L+KFR+  GWVL C  WP  G
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDG

TYJ98411.1 nucleotide binding protein [Cucumis melo var. makuwa]4.7e-1253.52Show/hide
Query:  CKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFR
        CKV +  YCIWF+   F +ED+EA KIL LS++   WFL++IS+ L+G  N ++LRNG D  G TRL KFR
Subjt:  CKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFR

TYJ98834.1 putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa]7.5e-1838.02Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ
        ME   CK++   YCIW E    F+ED+EAC+ +  S S L W    IS++L+   +    + G    G  R++KF+  SGWVL C  WP+ GG F +   
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ

Query:  EGIAQKGWISFLSMIKDFIQK
         G  Q+GW+S   M++ F++K
Subjt:  EGIAQKGWISFLSMIKDFIQK

TrEMBL top hitse value%identityAlignment
A0A5A7T3H6 Putative 3,4-dihydroxy-2-butanone kinase isoform X23.6e-1838.02Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ
        ME   CK++   YCIW E    F+ED+EAC+ +  S S L W    IS++L+   +    + G    G  R++KF+  SGWVL C  WP+ GG F +   
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ

Query:  EGIAQKGWISFLSMIKDFIQK
         G  Q+GW+S   M++ F++K
Subjt:  EGIAQKGWISFLSMIKDFIQK

A0A5A7VEL7 Uncharacterized protein2.1e-1342.53Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVA
        ME  S K+    YCIW +   F +ED++  K L +S++ L WF+  + D++Q   + + L+NGRD+ G TRLTKFR +  W++RCVA
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVA

A0A5D3BIA6 Nucleotide binding protein2.3e-1253.52Show/hide
Query:  CKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFR
        CKV +  YCIWF+   F +ED+EA KIL LS++   WFL++IS+ L+G  N ++LRNG D  G TRL KFR
Subjt:  CKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFR

A0A5D3BIE8 Putative 3,4-dihydroxy-2-butanone kinase isoform X13.6e-1838.02Show/hide
Query:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ
        ME   CK++   YCIW E    F+ED+EAC+ +  S S L W    IS++L+   +    + G    G  R++KF+  SGWVL C  WP+ GG F +   
Subjt:  MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQ

Query:  EGIAQKGWISFLSMIKDFIQK
         G  Q+GW+S   M++ F++K
Subjt:  EGIAQKGWISFLSMIKDFIQK

A0A5D3BTI0 Transposon TX1 uncharacterized8.6e-1243.04Show/hide
Query:  SCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVL
        SCK+ D FYCIW E G+F +ED++  KI+ LS++ L WF   I+ +++    ++  ++G D +G TRL+KF+  SGW L
Subjt:  SCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGGCAAGTTGCAAGGTGAACGATGATTTCTATTGCATTTGGTTCGAGGCTGGAAGGTTTTTTGTGGAAGATATGGAAGCTTGCAAAATCCTCCCATTA
TCCGAATCACATCTGCATTGGTTCTTGGAGCAAATTTCAGATATTCTGCAGGGTTCAAGAAATCGTTACATTTTAAGAAATGGTCGAGATTCATCGGGGGGTACA
AGACTGACAAAATTCAGAAATACTTCCGGATGGGTCCTGAGGTGTGTGGCTTGGCCGTTCGATGGTGGATGCTTCTTCCTACATGTACAGGAGGGGATTGCACAA
AAGGGGTGGATCTCCTTTCTGAGTATGATCAAAGATTTTATTCAGAAAAGAGCGTTCAAGGCAACGCAAGATGAAGGAATTGATATTAATGTACCAATCCAGGAA
TGGAAATTCCTTTTTCAGAAACAGCCGAGTTTCTCTAGAAATCCTAATTTGGAAACTAAAAAAAGTGTTGTCCAAGTTATAAAGTCATCATCAGAGATTAAGCAC
CTTCCACCGGAAAGCAAAGGGTCCCCTGTTTCCGACTACAATGCCATGAATTCCAAAAAGGTTACTCAGTCAGGTGTAAATGCATTTGAATTGAATTCGTTAGAA
GAATTTGAAGAGGCCAACTTATTGAGGAAAGAGAAAGTAGCCGACAACTTATTAATTGAAACCAATGGCATTTCACGGTCCGATTCCCCTCCCAATCAATTTTTG
AATAATAGTAATTTAGAGAATATTAACATTCCTCTGGAGGAAATCCAACAGCCAGAAGGGATCATCCATTATGACGATTCATCTTCTCCAGAGCTCAAGTCTTCA
TGTGCTGAGTCAGATGAACTTTTAGTCCCGCAGACGGGTCCTTTTTCTGTAGATATCTCCTTCAAGTGCAAAGCTGCATCAGGGATAAATAAAAACGAGAATTTA
GTGCAAGAAAAGAAGCCATTATCGGCTCCAAAGAAGAGGTCTCATTTGTTCAAGCCTTTCCCAAAACACTTTGCAAGAAAAAGAACTTCTTTCCTCAATTCATGG
TCTGCATTAGTTAACTCTGATTTGCTCGAAAATGTTGTGTTCGAGTTCAAGCTCCCGGGTTTACCTCCAATAGGTACTTCGCTTTCAAATCTAATCATTCCACGC
TCAAAGCAGCAAGATTCTGATGGGGAATCAGTGATTGATGACAACCCGATAATTGGCAAGATTGAGGATTCCGTCCTTCCTCCCATAGGCAAGAAGGAAATTCCA
CAACATTTGATTTCCATAATTGAAGATTGTGACATTACACTTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGGCAAGTTGCAAGGTGAACGATGATTTCTATTGCATTTGGTTCGAGGCTGGAAGGTTTTTTGTGGAAGATATGGAAGCTTGCAAAATCCTCCCATTA
TCCGAATCACATCTGCATTGGTTCTTGGAGCAAATTTCAGATATTCTGCAGGGTTCAAGAAATCGTTACATTTTAAGAAATGGTCGAGATTCATCGGGGGGTACA
AGACTGACAAAATTCAGAAATACTTCCGGATGGGTCCTGAGGTGTGTGGCTTGGCCGTTCGATGGTGGATGCTTCTTCCTACATGTACAGGAGGGGATTGCACAA
AAGGGGTGGATCTCCTTTCTGAGTATGATCAAAGATTTTATTCAGAAAAGAGCGTTCAAGGCAACGCAAGATGAAGGAATTGATATTAATGTACCAATCCAGGAA
TGGAAATTCCTTTTTCAGAAACAGCCGAGTTTCTCTAGAAATCCTAATTTGGAAACTAAAAAAAGTGTTGTCCAAGTTATAAAGTCATCATCAGAGATTAAGCAC
CTTCCACCGGAAAGCAAAGGGTCCCCTGTTTCCGACTACAATGCCATGAATTCCAAAAAGGTTACTCAGTCAGGTGTAAATGCATTTGAATTGAATTCGTTAGAA
GAATTTGAAGAGGCCAACTTATTGAGGAAAGAGAAAGTAGCCGACAACTTATTAATTGAAACCAATGGCATTTCACGGTCCGATTCCCCTCCCAATCAATTTTTG
AATAATAGTAATTTAGAGAATATTAACATTCCTCTGGAGGAAATCCAACAGCCAGAAGGGATCATCCATTATGACGATTCATCTTCTCCAGAGCTCAAGTCTTCA
TGTGCTGAGTCAGATGAACTTTTAGTCCCGCAGACGGGTCCTTTTTCTGTAGATATCTCCTTCAAGTGCAAAGCTGCATCAGGGATAAATAAAAACGAGAATTTA
GTGCAAGAAAAGAAGCCATTATCGGCTCCAAAGAAGAGGTCTCATTTGTTCAAGCCTTTCCCAAAACACTTTGCAAGAAAAAGAACTTCTTTCCTCAATTCATGG
TCTGCATTAGTTAACTCTGATTTGCTCGAAAATGTTGTGTTCGAGTTCAAGCTCCCGGGTTTACCTCCAATAGGTACTTCGCTTTCAAATCTAATCATTCCACGC
TCAAAGCAGCAAGATTCTGATGGGGAATCAGTGATTGATGACAACCCGATAATTGGCAAGATTGAGGATTCCGTCCTTCCTCCCATAGGCAAGAAGGAAATTCCA
CAACATTTGATTTCCATAATTGAAGATTGTGACATTACACTTGGATAA
Protein sequenceShow/hide protein sequence
MEAASCKVNDDFYCIWFEAGRFFVEDMEACKILPLSESHLHWFLEQISDILQGSRNRYILRNGRDSSGGTRLTKFRNTSGWVLRCVAWPFDGGCFFLHVQEGIAQ
KGWISFLSMIKDFIQKRAFKATQDEGIDINVPIQEWKFLFQKQPSFSRNPNLETKKSVVQVIKSSSEIKHLPPESKGSPVSDYNAMNSKKVTQSGVNAFELNSLE
EFEEANLLRKEKVADNLLIETNGISRSDSPPNQFLNNSNLENINIPLEEIQQPEGIIHYDDSSSPELKSSCAESDELLVPQTGPFSVDISFKCKAASGINKNENL
VQEKKPLSAPKKRSHLFKPFPKHFARKRTSFLNSWSALVNSDLLENVVFEFKLPGLPPIGTSLSNLIIPRSKQQDSDGESVIDDNPIIGKIEDSVLPPIGKKEIP
QHLISIIEDCDITLG