CuGenDBv2

Gene ID	HG10007834
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	exportin-4 isoform X1
Genome location	Chr10:14878571..14885319
RNA-Seq Expression	HG10007834
Synteny	HG10007834
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0051168 - nuclear export (biological process) GO:0005634 - nucleus (cellular component) GO:0005049 - nuclear export signal receptor activity (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical IPR044189 - Exportin 4/7-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443788.1 PREDICTED: exportin-4 isoform X1 [Cucumis melo]

4.6e-41

95.83

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI
        MQ FQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI

XP_011660266.1 exportin-4 isoform X1 [Cucumis sativus]

1.3e-40

94.79

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI
        MQ FQDASGPPNLAQLQATMQAIELAC SIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI

XP_022158368.1 exportin-4 isoform X1 [Momordica charantia]

5.0e-40

91.75

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR

XP_022158373.1 exportin-4 isoform X6 [Momordica charantia]

5.0e-40

91.75

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR

XP_038877264.1 exportin-4 [Benincasa hispida]

3.0e-40

94.79

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI
        MQ FQDASGP NLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPYQTCQFILENSQVANARFQAA AIRDAAIREWSFLTADVKR+LI
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY17 Uncharacterized protein

6.4e-41

94.79

Show/hide

Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI
        MQ FQDASGPPNLAQLQATMQAIELAC SIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI

A0A1S3B9L0 exportin-4 isoform X1

2.2e-41

95.83

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI
        MQ FQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQ+PHPY TCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKR+LI
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLI

A0A6J1DVW5 exportin-4 isoform X1

2.4e-40

91.75

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR

A0A6J1DX24 exportin-4 isoform X5

2.4e-40

91.75

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR

A0A6J1E0Q7 exportin-4 isoform X4

2.4e-40

91.75

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Query:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR
        MQ FQD+SGPPN+AQLQATMQAIELAC+SIQMHINPSAAEATILSLRQ+PHPYQTCQFILENS VANARFQAAAAIRDAAIREWSFLTADVK++LIR
Subjt:  MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIR

SwissProt top hits

e value

%identity

Alignment

Q499Y0 Exportin-4

3.5e-04

37.33

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Query:  LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        +AQL++  + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q5ZMR9 Exportin-4

3.5e-04

37.8

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Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A G P  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q802D3 Exportin-4

7.9e-04

35.9

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Query:  PPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        P  ++QL++  + + +A  S+        AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  PPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q9C0E2 Exportin-4

7.1e-05

39.02

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Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A GPP  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Q9ESJ0 Exportin-4

5.5e-05

39.02

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Query:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL
        A GPP  +AQL+   + + +A  S+  +     AE   LS R++  P+  C+ ILE S+V    FQAA AI +A +REW  L
Subjt:  ASGPPN-LAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFL

Arabidopsis top hits

e value

%identity

Alignment

AT3G04490.1 unknown protein

2.1e-28

58.26

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Query:  GPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRVWNREVFGDIR
        G  +LAQLQ+TM+AIELACS IQ++ NP AAEATILSL Q+P PY+ C++ILENSQVANARFQAAAAIR++AIREWSFL  D K  LI      V     
Subjt:  GPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRVWNREVFGDIR

Query:  IKKKEILARIDEIDA
          +  +L+++  + A
Subjt:  IKKKEILARIDEIDA

AT4G38092.1 unknown protein

9.5e-21

50.48

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Query:  TMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRVWNREVFGDIRIKKKEILARI
        T   ++++ S +Q++ NP AAEATILSL Q+P PY+ C++ILENSQVANARFQAAAAIR +AIREWSFL  D K  LI      V       +  +L+++
Subjt:  TMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRVWNREVFGDIRIKKKEILARI

Query:  DEIDA
          + A
Subjt:  DEIDA

Sequences

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CDS sequence

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ATGCAATGTTTTCAAGATGCCAGTGGCCCTCCAAACTTGGCTCAACTTCAGGCCACCATGCAAGCCATTGAGCTTGCCTGCAGTTCCATACAGATGCACATCAACCCATC
TGCAGCAGAGGCAACTATTCTATCACTTCGCCAGGCGCCTCATCCATATCAAACATGCCAGTTCATTCTTGAAAATTCTCAGGTAGCTAATGCACGATTTCAAGCTGCTG
CTGCAATTCGAGATGCTGCTATTAGGGAGTGGAGTTTTCTTACTGCTGATGTCAAGAGAACTTTAATTAGAGTGTGGAATAGAGAAGTCTTTGGAGATATCCGAATTAAG
AAGAAAGAGATCTTAGCTAGAATTGATGAGATTGACGCTCTCGAGCTGGAAGGTCCTCTTGTCGGCACTCTGATTCTTGAGAATGGGGTGTATACCAGTAATGACAAGGA
GATTGAGGAGGAAATTCTTTTGGCCTTCTCTAAGCTTTATAGTCCGACTATTCAGGAGAAACCGTTTGTGGAAGGCATTGATTGGAGCCCATTTCTTCTAGGGAGGATGA
GGAGCTAG

mRNA sequence

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Protein sequence

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MQCFQDASGPPNLAQLQATMQAIELACSSIQMHINPSAAEATILSLRQAPHPYQTCQFILENSQVANARFQAAAAIRDAAIREWSFLTADVKRTLIRVWNREVFGDIRIK
KKEILARIDEIDALELEGPLVGTLILENGVYTSNDKEIEEEILLAFSKLYSPTIQEKPFVEGIDWSPFLLGRMRS

HG10007834 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome