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HG10007835 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007835
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionexportin-4 isoform X1
Genome locationChr10:14886184..14906419
RNA-Seq ExpressionHG10007835
SyntenyHG10007835
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0051168 - nuclear export (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005049 - nuclear export signal receptor activity (molecular function)
InterPro domainsIPR044189 - Exportin 4/7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158368.1 exportin-4 isoform X1 [Momordica charantia]1.1e-1778.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
XP_022158370.1 exportin-4 isoform X3 [Momordica charantia]1.1e-1778.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
XP_022158372.1 exportin-4 isoform X5 [Momordica charantia]1.1e-1778.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
XP_022158373.1 exportin-4 isoform X6 [Momordica charantia]1.1e-1778.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
XP_038877264.1 exportin-4 [Benincasa hispida]5.0e-1887.72Show/hide
Query:  RSKSGFCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSL
        RS   FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQ  +S+
Subjt:  RSKSGFCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSL
TrEMBL top hitse value%identityAlignment
A0A6J1DVW5 exportin-4 isoform X15.4e-1878.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
A0A6J1DVW9 exportin-4 isoform X65.4e-1878.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
A0A6J1DX24 exportin-4 isoform X55.4e-1878.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
A0A6J1DZ78 exportin-4 isoform X75.4e-1878.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
A0A6J1E0Q7 exportin-4 isoform X45.4e-1878.69Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCLCY+MQHASSPERYVQAKVSAVAAQLMKRGWLDFEASE+ESFFYQ  +S+  +  +D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G04490.1 unknown protein1.4e-1360.66Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
        FCL YVMQHA+S E YV +KVS+VAAQLMKRGWL+F  ++KE FFYQ  +++  S   D Q
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQLMKRGWLDFEASEKESFFYQFLKSLRKSWTADDQ
AT4G38092.1 unknown protein2.0e-0475Show/hide
Query:  FCLCYVMQHASSPERYVQAKVSAVAAQL
        FCL YVMQHA+S E YV +KVS+VAAQL
Subjt:  FCLCYVMQHASSPERYVQAKVSAVAAQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGAAAAGCTGTAATATCAAAGGAGTCCATTTCTGCTCATGGTTTGACTCAGATACTTTCAAAGTGGAAGATGTGGAGGCTAGCAAACACGTCCCTCTTTCTGG
CTCTCATATGTTATGGTTTATTGAGAATATATCTGAATTATCTCAAGGCTCTGCTTCTCGTTATTTCGAGCGAAGTGGTCGTGACATTTCAGGAGTCACAAAATTATCAA
AATTCCGTTCAAAGTCAGGTTTCTGTCTGTGCTATGTCATGCAACATGCAAGCTCACCAGAGCGCTATGTTCAGGCAAAGGTTTCTGCTGTGGCTGCTCAATTGATGAAA
AGGGGCTGGCTCGATTTTGAAGCCTCTGAGAAGGAGTCTTTCTTTTATCAGTTCCTAAAAAGTTTGAGAAAGTCTTGGACCGCCGATGATCAAGGGTTTTTGGTGGAACT
ACGAATGCTAAGGGCGAACATTGAAGAACTTATGTGCAAGGCTCCCACTGTCGCGATACCACCCCAGGGTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGAAAAGCTGTAATATCAAAGGAGTCCATTTCTGCTCATGGTTTGACTCAGATACTTTCAAAGTGGAAGATGTGGAGGCTAGCAAACACGTCCCTCTTTCTGG
CTCTCATATGTTATGGTTTATTGAGAATATATCTGAATTATCTCAAGGCTCTGCTTCTCGTTATTTCGAGCGAAGTGGTCGTGACATTTCAGGAGTCACAAAATTATCAA
AATTCCGTTCAAAGTCAGGTTTCTGTCTGTGCTATGTCATGCAACATGCAAGCTCACCAGAGCGCTATGTTCAGGCAAAGGTTTCTGCTGTGGCTGCTCAATTGATGAAA
AGGGGCTGGCTCGATTTTGAAGCCTCTGAGAAGGAGTCTTTCTTTTATCAGTTCCTAAAAAGTTTGAGAAAGTCTTGGACCGCCGATGATCAAGGGTTTTTGGTGGAACT
ACGAATGCTAAGGGCGAACATTGAAGAACTTATGTGCAAGGCTCCCACTGTCGCGATACCACCCCAGGGTACATGA
Protein sequenceShow/hide protein sequence
METKSCNIKGVHFCSWFDSDTFKVEDVEASKHVPLSGSHMLWFIENISELSQGSASRYFERSGRDISGVTKLSKFRSKSGFCLCYVMQHASSPERYVQAKVSAVAAQLMK
RGWLDFEASEKESFFYQFLKSLRKSWTADDQGFLVELRMLRANIEELMCKAPTVAIPPQGT