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HG10007852 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007852
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin-like-specific protease ESD4 isoform X2
Genome locationChr10:15823794..15824654
RNA-Seq ExpressionHG10007852
SyntenyHG10007852
Gene Ontology termsGO:0019538 - protein metabolic process (biological process)
GO:0015935 - small ribosomal subunit (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]6.4e-1762.63Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK TR+SPRI+D
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

KAA0037325.1 hypothetical protein E6C27_scaffold278G00130 [Cucumis melo var. makuwa]2.3e-2254.55Show/hide
Query:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ
        M+DA+VD N+DK    AT   KEK                       EIEDNEE++DN  EN+SKMVHDTSNK   VQEK  +K +EIAKN+EN RP RQ
Subjt:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ

Query:  PKPSKKILDNAKDQKIAKD-QRNAKDQKKASPKQTRHSPRIKD
        PKPSKK+L+N K+QK  KD Q+NA+ +K  SPK TRHSP IKD
Subjt:  PKPSKKILDNAKDQKIAKD-QRNAKDQKKASPKQTRHSPRIKD

KAA0065297.1 hypothetical protein E6C27_scaffold1023G00110 [Cucumis melo var. makuwa]2.9e-1762.63Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK T+HSPRI+D
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]5.8e-1864.65Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK TRHSPRIKD
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

TYK15261.1 hypothetical protein E5676_scaffold892G00380 [Cucumis melo var. makuwa]6.4e-1762.63Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK TR+SPRI+D
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

TrEMBL top hitse value%identityAlignment
A0A0A0LZ92 Uncharacterized protein7.9e-2153.52Show/hide
Query:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ
        M+DAD+DTN+D+ V YAT+  K+K+  +  D+ KE+ T     VD NEI   EE++DN REN+SK VHD S K   VQEKA  K +EI KN+EN R  R+
Subjt:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ

Query:  PKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        PKPSKK+L+N KDQK  KDQ+N K +KK S + TR S R K+
Subjt:  PKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

A0A5A7T785 Uncharacterized protein1.1e-2254.55Show/hide
Query:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ
        M+DA+VD N+DK    AT   KEK                       EIEDNEE++DN  EN+SKMVHDTSNK   VQEK  +K +EIAKN+EN RP RQ
Subjt:  MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQ

Query:  PKPSKKILDNAKDQKIAKD-QRNAKDQKKASPKQTRHSPRIKD
        PKPSKK+L+N K+QK  KD Q+NA+ +K  SPK TRHSP IKD
Subjt:  PKPSKKILDNAKDQKIAKD-QRNAKDQKKASPKQTRHSPRIKD

A0A5A7VDY1 Uncharacterized protein1.4e-1762.63Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK T+HSPRI+D
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

A0A5A7VIA9 Uncharacterized protein3.1e-1762.63Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK TR+SPRI+D
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

A0A5D3C8N2 40S ribosomal protein S15-42.8e-1864.65Show/hide
Query:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD
        E EIEDNE  EE+DN REN+SKMVHDTSNK   VQEKA +K +EIA N+E  RP RQPKPSKK+L+N K+QK      N + +K  SPK TRHSPRIKD
Subjt:  ENEIEDNE--EEEDNERENRSKMVHDTSNK---VQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKDQKIAKDQRNAKDQKKASPKQTRHSPRIKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATGCTGATGTTGATACTAATGTTGATAAAACGGTTGAATATGCAACTACTTATGTGAAGGAGAAAAAGCATGGAGAAACTCGTGATAAAGAAAAAGAAGAAAC
CACCACTACTGTCGCTGCCGTTGATGAAAATGAGATTGAAGACAATGAGGAAGAAGAAGATAATGAACGTGAAAATAGGTCAAAGATGGTCCATGACACTTCAAACAAGG
TTCAAGAAAAGGCAAATATGAAAGCTATAGAAATAGCAAAGAACGTTGAAAATGTTAGGCCGAATAGACAACCTAAACCATCAAAGAAAATCTTGGATAATGCAAAAGAC
CAAAAGATTGCAAAAGACCAGAGGAATGCAAAAGACCAAAAGAAAGCTTCTCCAAAACAAACAAGGCATTCTCCTAGAATAAAAGATTGTGGATATTTGCAGTATTTAGG
TGATAGAAAAGGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGATGCTGATGTTGATACTAATGTTGATAAAACGGTTGAATATGCAACTACTTATGTGAAGGAGAAAAAGCATGGAGAAACTCGTGATAAAGAAAAAGAAGAAAC
CACCACTACTGTCGCTGCCGTTGATGAAAATGAGATTGAAGACAATGAGGAAGAAGAAGATAATGAACGTGAAAATAGGTCAAAGATGGTCCATGACACTTCAAACAAGG
TTCAAGAAAAGGCAAATATGAAAGCTATAGAAATAGCAAAGAACGTTGAAAATGTTAGGCCGAATAGACAACCTAAACCATCAAAGAAAATCTTGGATAATGCAAAAGAC
CAAAAGATTGCAAAAGACCAGAGGAATGCAAAAGACCAAAAGAAAGCTTCTCCAAAACAAACAAGGCATTCTCCTAGAATAAAAGATTGTGGATATTTGCAGTATTTAGG
TGATAGAAAAGGTCAATGA
Protein sequenceShow/hide protein sequence
MLDADVDTNVDKTVEYATTYVKEKKHGETRDKEKEETTTTVAAVDENEIEDNEEEEDNERENRSKMVHDTSNKVQEKANMKAIEIAKNVENVRPNRQPKPSKKILDNAKD
QKIAKDQRNAKDQKKASPKQTRHSPRIKDCGYLQYLGDRKGQ