| GenBank top hits | e value | %identity | Alignment |
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| OMO69928.1 reverse transcriptase [Corchorus capsularis] | 6.7e-37 | 51.27 | Show/hide |
Query: HAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
H VT EMN L++ ++ EE+ +NQM TKAPGPD Q+ I +I ++ E + +RPISLCNV+YKI++K + NRLK+ ISENQSAF+P R I
Subjt: HAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
Query: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVIS
DNI++ +E +H L++ + GK G A+KLD+SKAY+RVEW FL A+M RLGFD R ++
Subjt: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVIS
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| XP_016694556.2 uncharacterized protein LOC107911187 [Gossypium hirsutum] | 1.6e-38 | 35.97 | Show/hide |
Query: IEVRFTSG-SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQF-----SLKERLNRCSKS
I+ R G +N+ W LF V + HL FSNH ++ L + + N F+FE +W ++ I E LWE++ + LKE L ++
Subjt: IEVRFTSG-SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQF-----SLKERLNRCSKS
Query: LKVSRRGKNKNLKSR----------------IMECKLALQAAYDN----PHAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELW
++ +R+ + L + +++ K++L + + E N +L A YS+EEV + M TKAPG DGF +F + W
Subjt: LKVSRRGKNKNLKSR----------------IMECKLALQAAYDN----PHAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELW
Query: EV--GDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
++ D+RPISLCNV+YKI+ K IANRL+L+ + I E QSAF+ R I +N+++ +E +H LK K++GK G +AVKLD+SKAY+RVEW F+ IM ++G
Subjt: EV--GDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
Query: FDL
FDL
Subjt: FDL
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| XP_021732105.1 uncharacterized protein LOC110698909 [Chenopodium quinoa] | 1.5e-36 | 34.44 | Show/hide |
Query: GSNSFWELFNSVSILHLDWLFSNHHSI-MKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQFSLKERLNRCSKSLKVSRRGKNKNLK
GS+ + +F V++ HL + S+H I + + + +RK FKFE +W ++ C+ IE G WE + ++ + L R ++NL
Subjt: GSNSFWELFNSVSILHLDWLFSNHHSI-MKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQFSLKERLNRCSKSLKVSRRGKNKNLK
Query: SRIMECKLALQAAYDNPHAVTN-----EMNDKLVAR----------------YSKEEVERPINQMFLTKAPGPDG----FQQSFINIIG-----------
+I + ALQ A + P V + E+ K++ R YS+EEV + M +KAPGPDG F Q F +I+G
Subjt: SRIMECKLALQAAYDNPHAVTN-----EMNDKLVAR----------------YSKEEVERPINQMFLTKAPGPDG----FQQSFINIIG-----------
Query: ---------------------ELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKL
E D+RPISLCNVIYK++TK I RLK + IISENQSAF+P R I DN +I EC H +K +R G+ G +A+KL
Subjt: ---------------------ELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKL
Query: DLSKAYNRVEWSFLIAIMARLGFDLRVISYS
D+SKAY+RVEW FL ++ ++GFD R ++ S
Subjt: DLSKAYNRVEWSFLIAIMARLGFDLRVISYS
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| XP_041026997.1 uncharacterized protein LOC121267211 [Juglans microcarpa x Juglans regia] | 5.6e-36 | 32.26 | Show/hide |
Query: SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQFS-LKERLN---RCSKSLK--VSRRGK
+N W E F V + L S+H ++ + + +R+ + FKFE W ++++C+ +++K +WE + +K+ LN RCS L S+R +
Subjt: SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQFS-LKERLN---RCSKSLK--VSRRGK
Query: NKNLKSRIMECKLALQAAYDNPHA----------------------------------------------------VTNEMNDKLVARYSKEEVERPINQ
+ K ++ ++ + P VT+ MN+ L R+ +EEVE +
Subjt: NKNLKSRIMECKLALQAAYDNPHA----------------------------------------------------VTNEMNDKLVARYSKEEVERPINQ
Query: MFLTKAPGPDGFQQSFI-----NIIGEL---WEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGK
M K+ GPDG+ F + GEL +VGD+RPISLCNV+YK++ KT+ANRLK + D ++S+NQSAFIP R I DNI+ +E +H +K + GK
Subjt: MFLTKAPGPDGFQQSFI-----NIIGEL---WEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGK
Query: DGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVISYSEG
G +A+KLD+SKAY+RVEW +L IM ++GF R IS G
Subjt: DGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVISYSEG
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| XP_042988698.1 uncharacterized protein LOC122316231 [Carya illinoinensis] | 2.4e-39 | 25.95 | Show/hide |
Query: SNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWE---SNHCQFSLKERLNRCSKSLKVSRRGKNKNLKSRIMECKLALQA-------
S+H I+ V S + + +N F+FE W DDEC +I + W+ N S+ +RL+ CS+ L+ + K ++K +I + +LQ+
Subjt: SNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWE---SNHCQFSLKERLNRCSKSLKVSRRGKNKNLKSRIMECKLALQA-------
Query: ----------------------AYDNPHA--------------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-------------------FQQ
N A VT +MN +L+ ++ EEV+ +NQM TK+PGPDG
Subjt: ----------------------AYDNPHA--------------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-------------------FQQ
Query: SFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEW
+FI +I + + + +RPISLCNV+YK+++K +ANRLK + D +IS +Q AF+P R I DNI+I +E +HYL+ +R GK+G +++KLD+ KAY+RVEW
Subjt: SFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEW
Query: SFLIAIMARLGFD----------LRVISY--------------SEGMR----------------------------------------------------
SF+ ++M+R+GF+ ++ +S+ S G+R
Subjt: SFLIAIMARLGFD----------LRVISY--------------SEGMR----------------------------------------------------
Query: -------------------FRIADGKSIR------MFLNPWIPKEITFKPRCLDERNT---------------CNKGKKLIPHNLRSNWIH---SYYEEF
+ +A G+ I +F IP+ +N+ G+ LI N +N I+ S Y F
Subjt: -------------------FRIADGKSIR------MFLNPWIPKEITFKPRCLDERNT---------------CNKGKKLIPHNLRSNWIH---SYYEEF
Query: E-------------ASLKRNL-----SLKSVDHDSFK---------IQAKC-WIPPPSGFSKLNTDIAWSPSPSSTILGLVIQDDCGSISAISASHLPID
+ A L R + ++K S+K I+ +C W PPSG KLN D A+S + S G +++D G + +SA+ +
Subjt: E-------------ASLKRNL-----SLKSVDHDSFK---------IQAKC-WIPPPSGFSKLNTDIAWSPSPSSTILGLVIQDDCGSISAISASHLPID
Query: FTPPL-VEVLAITDGLKLALSLEKRWLIVESDSLQAINLIVRKAEAEGEVSYWIEEICYLKDKFDYCLLGHVSRSCNLFVDSIAKW
+ VE LAI GL+ + L LI+ESDSL + + ++ I E L +F C + HVSRS N S+AK+
Subjt: FTPPL-VEVLAITDGLKLALSLEKRWLIVESDSLQAINLIVRKAEAEGEVSYWIEEICYLKDKFDYCLLGHVSRSCNLFVDSIAKW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1R3HHY9 Reverse transcriptase | 3.2e-37 | 51.27 | Show/hide |
Query: HAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
H VT EMN L++ ++ EE+ +NQM TKAPGPD Q+ I +I ++ E + +RPISLCNV+YKI++K + NRLK+ ISENQSAF+P R I
Subjt: HAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELWE---VGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
Query: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVIS
DNI++ +E +H L++ + GK G A+KLD+SKAY+RVEW FL A+M RLGFD R ++
Subjt: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFDLRVIS
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| A0A1U8JWA5 uncharacterized protein LOC107911187 | 7.7e-39 | 35.97 | Show/hide |
Query: IEVRFTSG-SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQF-----SLKERLNRCSKS
I+ R G +N+ W LF V + HL FSNH ++ L + + N F+FE +W ++ I E LWE++ + LKE L ++
Subjt: IEVRFTSG-SNSFW-ELFNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLWESNHCQF-----SLKERLNRCSKS
Query: LKVSRRGKNKNLKSR----------------IMECKLALQAAYDN----PHAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELW
++ +R+ + L + +++ K++L + + E N +L A YS+EEV + M TKAPG DGF +F + W
Subjt: LKVSRRGKNKNLKSR----------------IMECKLALQAAYDN----PHAVTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDGFQQSFINIIGELW
Query: EV--GDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
++ D+RPISLCNV+YKI+ K IANRL+L+ + I E QSAF+ R I +N+++ +E +H LK K++GK G +AVKLD+SKAY+RVEW F+ IM ++G
Subjt: EV--GDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
Query: FDL
FDL
Subjt: FDL
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| A0A2N9HTH6 Reverse transcriptase domain-containing protein | 1.9e-37 | 34.34 | Show/hide |
Query: FNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLW----ESNHCQFSLKERLNRCSKSLKVSRRGKNKNLKSRIME
+ + HL L S+H ++ + + +RK F FE W +D++CKS+IE A W + F + E+L C +L K N SRI
Subjt: FNSVSILHLDWLFSNHHSIMKVLSLGRSNGKRKNWPFKFEEFWTRDDECKSIIEKAGLW----ESNHCQFSLKERLNRCSKSLKVSRRGKNKNLKSRIME
Query: CKLALQ-AAYDNPHA----------------------------------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG----FQQSFINIIG--
+ LQ ++P VT MN +LVA ++ EEV + + QM+ TKAPGPDG F QS+ I+G
Subjt: CKLALQ-AAYDNPHA----------------------------------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG----FQQSFINIIG--
Query: ------------------------------ELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIG
E ++ DYRPI+LCNVIYKIV+K +ANRLK + +IS QSAF+P R I DN+++ E +H + K G
Subjt: ------------------------------ELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIG
Query: KDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
K G +A+KLD+SKAY+RVEW F+ A+M RLGF
Subjt: KDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
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| A0A2N9IXL7 Uncharacterized protein | 9.4e-37 | 36.18 | Show/hide |
Query: SNSFWELFNSVSILHLDWLFSNHHSIMKVLSLGRSNG-----KRKNWPFKFEEFWTRDDECKSIIEKAGLWE---SNHCQFSLKERLNRCSKSLKVSRRG
S + LF +I HL S+H ++ L+ ++G +R+ F+FE+ W R+ C+ +I AG W + + E++ +C +L +
Subjt: SNSFWELFNSVSILHLDWLFSNHHSIMKVLSLGRSNG-----KRKNWPFKFEEFWTRDDECKSIIEKAGLWE---SNHCQFSLKERLNRCSKSLKVSRRG
Query: KNKNLKSRIMECKLALQAAYD------NPHA-----------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-FQQSFINIIGELW---EVGDYR
+ +S E + A ++ NP A VT MN++L+ + KEEV++ + QM+ +KAPGPDG + I +I ++ ++ +R
Subjt: KNKNLKSRIMECKLALQAAYD------NPHA-----------VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-FQQSFINIIGELW---EVGDYR
Query: PISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
PISLCNV+YKI +K + NR+K + ++ISE+QSAF+P R I DN++I E IHYLKN R G + +A KLD+SKAY+RVEW +L AIM +LGF
Subjt: PISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
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| A0A803PVP3 Uncharacterized protein | 4.2e-37 | 51.97 | Show/hide |
Query: VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-----FQQSFINIIGELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
VT EMND L A+ S++EV + + M K+PGPDG +Q+ + + + +GD RPI+LCNV++K++TK +ANR+K + D+I++ NQSAFIP R I
Subjt: VTNEMNDKLVARYSKEEVERPINQMFLTKAPGPDG-----FQQSFINIIGELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAI
Query: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
IDNI++ E +HYLK KR GKDG +A+KLD+SKAY+RVEW FL AI+ ++GF
Subjt: IDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.8e-05 | 28 | Show/hide |
Query: DYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFD---
++RPISL N+ KI+ K +ANR++ ++I +Q FIP NI I ++ R V + +D KA+++++ F++ + +LG D
Subjt: DYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLGFD---
Query: LRVIS--YSEGMRFRIADGKSIRMF
L++I Y + I +G+ + F
Subjt: LRVIS--YSEGMRFRIADGKSIRMF
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| P08548 LINE-1 reverse transcriptase homolog | 8.8e-08 | 25.11 | Show/hide |
Query: YDNPHAVTNEMNDKLVARYSKEEVE---RPINQMFLT---------KAPGPDGFQQSF------------INIIGELWEVG-------------------
Y+N + + + R S++EVE RPI+ + K+PGPDGF F +N+ + + G
Subjt: YDNPHAVTNEMNDKLVARYSKEEVE---RPINQMFLT---------KAPGPDGFQQSF------------INIIGELWEVG-------------------
Query: ------DYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARL
+YRPISL N+ KI+ K + NR++ +II +Q FIP NI I ++ NK KD ++ + +D KA++ ++ F+I + ++
Subjt: ------DYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARL
Query: GFD---LRVIS--YSEGMRFRIADGKSIRMF
G + L++I YS+ I +G ++ F
Subjt: GFD---LRVIS--YSEGMRFRIADGKSIRMF
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| P11369 LINE-1 retrotransposable element ORF2 protein | 2.5e-10 | 29.38 | Show/hide |
Query: DKLVARYSKEEVERPINQMFLTKAPGPDGFQQSF--------INIIGELW-----------------------------EVGDYRPISLCNVIYKIVTKT
D L + S +E+E IN + K+PGPDGF F I I+ +L+ ++ ++RPISL N+ KI+ K
Subjt: DKLVARYSKEEVERPINQMFLTKAPGPDGFQQSF--------INIIGELW-----------------------------EVGDYRPISLCNVIYKIVTKT
Query: IANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
+ANR++ II +Q FIP NI IHY+ NK K+ ++ + LD KA+++++ F+I ++ R G
Subjt: IANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMARLG
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 3.8e-11 | 32.46 | Show/hide |
Query: GELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMAR
G+L + ++RP+SL + YKIV K I+ RLK + E+I +QS +P R I DN+ + + +H+ + + L + LD KA++RV+ +LI +
Subjt: GELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVKLDLSKAYNRVEWSFLIAIMAR
Query: LGFDLRVISYSEGM
F + + Y + M
Subjt: LGFDLRVISYSEGM
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| Q03279 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 5.9e-04 | 29.63 | Show/hide |
Query: MFLTKAPGP-DGFQQSFINIIGELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVK
+F + P P G + F I + G +RP+S+C+VI + K +A R + E Q+A++P + N+ + I + KR+ K+ +A+
Subjt: MFLTKAPGP-DGFQQSFINIIGELWEVGDYRPISLCNVIYKIVTKTIANRLKLIFDEIISENQSAFIPRRAIIDNIMIGHECIHYLKNKRIGKDGLVAVK
Query: LDLSKAYNRVEWSFLIAIMARLGFDLRVISYSEGM
LDL KA+N V S LI + G V+ Y M
Subjt: LDLSKAYNRVEWSFLIAIMARLGFDLRVISYSEGM
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